Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0852 ATGGGCGGAGGTGGACCGAACGCGGAGGCACAGTATTCGACGGCCAAGACCTCCGTGTGGTGGGACATAGAGAACTGCCACGTTCCTAAAGGCTGCGATCCCCACGCCATCGCTCAGAACATCAGCTCTGCACTGGTCCGCATGAATTACTGTGGTCCCGTCTCCGTCTCCGCCTACGGCGACACCACTCGTATCCCCGCCTCTGTACAGCACGCTCTCTCCAGCACCGGCATCTCCCTCAACCATGTCCCCGCTGGCGTTAAAGATGCTAGCGACAAGAAGATTCTTGTTGACATGCTGTTTTGGGCAGTGGACAATCCCGCACCTGCTAATTATTTATTAATTTCTGGCGACAGAGACTTCTCTAATGCTCTCCATCAACTGCGGATGAGAAGATATAATATTCTTCTTGCGCAACCTCAGAAAGCATCTGCACCACTAGTAGCAGCTGCTAAGAGTGTATGGCTCTGGACTAGTCTTTTAGCTGGAGGGCCTCCTCTAACTAATGGCGAATCACAACAACTTGGTAATAATAGCCTTGTAACAAGTTCCGACACCTTAACAATTCCAGTCACTAGTGTCGCTCAGACACAGCCACAGGCTGATTCCTACACCGAAGTGCATGTAGGAAATCAGAAGTTTCCAAATGGAGGAGGAAGGGGATACGATCCTAGGTATCAGGGGAAAACAAATTGGAGAAACTCGGGTCAGACAAATGGACCCAAGGCCATGAATCCACCGCCAGTTGGGCATCAAGATAGTCGTAATAATATAAACTCTTATCGACCTGGCAACTTCAATCCAAATGTTTCTTCAAGTGGACCTGCTCCAAATTTTATTCGTGGCAATACTGAACAGTTATGGAACAATAGCAATAATATACAGGGAAATCATCAAAATCCTTATTCACAGCCTCCTTTAAGACCAAACAGTTTCCCGCTGCAACCTCCTTTTGCATCGAATAATTCTTACCCTCCAAGTACCCATACTTTTGCAAATTCACCATTGCCACCGAGGACTGGTGTCCCCAGCTTCACTGCAGTTCCACCACCAAATGTGCCTGAAATTGGCAATCTGAACATTTCTGGATATCCCAATGGTGTTCATAATCCACGTCCTGTTAAGCAACGCAGTGGGGAATTGAAGCAGAATCCTAACAATAATGCTCCACTTCCGGTAACATCAACTGTTGAACAAAATGGACATATGGTACTTAGCAATAGCACGCAACATTTACAAGGCTATTCAAATGGAAATGGTCCAGACCATCAACTTGCATCATCGACGGGTAATAATAACCATTCTGGTAATGGCATGTGGGGATCTCCAGGTTGCCCTAAACCGTCTGAATATGTCCAAGGCCTTATAGGGGTTGTTTTACTAGCCTTGAATTCACTAAAAAATGAGAAGATTATGCCAACAGAGGCAAATATAACTGATTGCATTCGATATGGAGATCCCAGGCACCGCAACACTGATGTTAAGAAAGCTTTGGAGAGTGCTATTGAGCAGCAGATGGTGGTGAAACAGAATTTAGGTGCTTTGCAGCTGTATGTTGGTAAGAATGATAAACTTTGGAAGTGCATAAATCCTATAGCTGGTAATCCTAAGCAGCACTCAAAAGAAACCTGGGATGAAGTTCAAAAGTTTCTGACAACTTCTTCAGGAAGATCAGCATTGATGGGTACTCAGTGCAAGTATGAAGCAGGAAGGTTAACTACTGGACCTAGAACATTGAAATTGTACAAAACTGAAGGAGACTGCATTCCCCCTGCAGTGAAGCTCATATTAAACTATTCTCAACAAAATTACAAGGTATGTTATGGAGTTTTGACTATGAACAAATCACGTTATGGAGTTTAG 1863 0.4487 MGGGGPNAEAQYSTAKTSVWWDIENCHVPKGCDPHAIAQNISSALVRMNYCGPVSVSAYGDTTRIPASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTSLLAGGPPLTNGESQQLGNNSLVTSSDTLTIPVTSVAQTQPQADSYTEVHVGNQKFPNGGGRGYDPRYQGKTNWRNSGQTNGPKAMNPPPVGHQDSRNNINSYRPGNFNPNVSSSGPAPNFIRGNTEQLWNNSNNIQGNHQNPYSQPPLRPNSFPLQPPFASNNSYPPSTHTFANSPLPPRTGVPSFTAVPPPNVPEIGNLNISGYPNGVHNPRPVKQRSGELKQNPNNNAPLPVTSTVEQNGHMVLSNSTQHLQGYSNGNGPDHQLASSTGNNNHSGNGMWGSPGCPKPSEYVQGLIGVVLLALNSLKNEKIMPTEANITDCIRYGDPRHRNTDVKKALESAIEQQMVVKQNLGALQLYVGKNDKLWKCINPIAGNPKQHSKETWDEVQKFLTTSSGRSALMGTQCKYEAGRLTTGPRTLKLYKTEGDCIPPAVKLILNYSQQNYKVCYGVLTMNKSRYGV* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0852 620 CDD PIN_limkain_b1_N_like 16 140 - -
Ahy16g0852 620 Gene3D - 7 159 - -
Ahy16g0852 620 PANTHER LIMKAIN B LKAP 2 571 IPR024768 GO:0005777|GO:0010468|GO:1903231
Ahy16g0852 620 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 2 571 - -
Ahy16g0852 620 MobiDBLite consensus disorder prediction 410 439 - -
Ahy16g0852 620 MobiDBLite consensus disorder prediction 410 444 - -
Ahy16g0852 620 Pfam NYN domain 16 152 IPR021139 GO:0004540
Ahy16g0852 620 MobiDBLite consensus disorder prediction 314 340 - -
Ahy16g0852 620 MobiDBLite consensus disorder prediction 250 305 - -
Ahy16g0852 620 MobiDBLite consensus disorder prediction 209 342 - -
Ahy16g0852 620 MobiDBLite consensus disorder prediction 363 394 - -
Ahy16g0852 620 MobiDBLite consensus disorder prediction 228 242 - -
Ahy16g0852 620 MobiDBLite consensus disorder prediction 377 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0852 Ahy-Chr16 15198339 15202247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0852 8 199 C2H2 Transcription Factor Family AT5G61190 71.282 2.04e-86 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0852 - - gmx:100794608 942.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0852 16 15198339 15202247 Ahy6g0503 6 6120705 6124696 hybridization