Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0843 ATGGACTATCGTTGGACCAATGGGAGACAGGACACTGGCAGTGGCCGAGACAGGAGACAACATAAAAGAGACCAGGCATATCAGGACTCCTCTGTTGAGAATTCGTTGGAGGATTTTCGTTTGCCGATCAACCACAGGCCAACAGAGAATGTTGACCTGGAAAATGTAGAACAAGCATCCCTTGATACGCAGTTAACGTCATCTAATATTGGCTTCAAGCTTCTCCAAAAGATGGGTTGGAAAGGAAAAGGTCTTGGGAAGGATGAGCAAGGAATCATTGAGCCAATAAAGTCGGGGATGAGAGATCCAAGACTTGGGGTTGGTAAACAAGAGGAGGATGATTTTTTCACCGCAGAGGAAAATATCCAGCGAAGAAAACTAGATATTGAGTTGGAGGAGACAGAGGAAAATGTGAGAAAGCGGGAGGTGTTAGCAGAACGCGAACAAAAAATTCAAACCGAAGTGAAAGAAATTCGAAAGGTGTTCTATTGTGAACTCTGCAACAAGCAATACAAATTGGCAATGGAATTTGAAGCACACTTGAGCTCTTATGATCACAATCACAGAAAGCGTTTCAAACAAATGAAGGAAATGCATGGTGGTAGTAGCCGAGATGATAGGCAAAAACGAGAACAACAGCGTCAAGAGAAAGAGATGGCGAAGTTTGCTCAAATGGCTGATGCACAAAAGCAACAACGACTTCAACTGCAGCAAGAGTCTGGATCAGCATCAGCTTCGTCTGGATCAAAAACTGCTACTGCACTAACAGATCAAGAGCAGCGGAACACGTTGAAATTTGGGTTTTCTTCTAAAGGCACTGCTTCGAAGGTCTCGGTTGGTATCAAGAAGCCAAATATTGCAAAGAAAAAAAATGTTCCCATTTCATCGATTTTTGGCAATGATTCTGATGAAGAATAG 918 0.4292 MDYRWTNGRQDTGSGRDRRQHKRDQAYQDSSVENSLEDFRLPINHRPTENVDLENVEQASLDTQLTSSNIGFKLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPRLGVGKQEEDDFFTAEENIQRRKLDIELEETEENVRKREVLAEREQKIQTEVKEIRKVFYCELCNKQYKLAMEFEAHLSSYDHNHRKRFKQMKEMHGGSSRDDRQKREQQRQEKEMAKFAQMADAQKQQRLQLQQESGSASASSGSKTATALTDQEQRNTLKFGFSSKGTASKVSVGIKKPNIAKKKNVPISSIFGNDSDEE* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0843 305 Coils Coil 117 144 - -
Ahy16g0843 305 MobiDBLite consensus disorder prediction 1 37 - -
Ahy16g0843 305 SMART G-patch_5 65 110 IPR000467 GO:0003676
Ahy16g0843 305 Coils Coil 219 239 - -
Ahy16g0843 305 MobiDBLite consensus disorder prediction 195 305 - -
Ahy16g0843 305 Pfam Zinc-finger double-stranded RNA-binding 162 189 IPR022755 -
Ahy16g0843 305 ProSiteProfiles G-patch domain profile. 67 112 IPR000467 GO:0003676
Ahy16g0843 305 ProSitePatterns Zinc finger C2H2 type domain signature. 164 186 IPR013087 -
Ahy16g0843 305 MobiDBLite consensus disorder prediction 195 223 - -
Ahy16g0843 305 MobiDBLite consensus disorder prediction 228 276 - -
Ahy16g0843 305 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 1 305 - -
Ahy16g0843 305 Pfam G-patch domain 68 108 IPR000467 GO:0003676
Ahy16g0843 305 SUPERFAMILY beta-beta-alpha zinc fingers 143 197 IPR036236 -
Ahy16g0843 305 MobiDBLite consensus disorder prediction 11 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0843 Ahy-Chr16 15085633 15088976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0843 13 305 C2H2 Transcription Factor Family AT5G26610 65.217 2.17e-125 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0843 - - gmx:100793206 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0843 16 15085633 15088976 Ahy16g0843 16 15085633 15088976 ECH
Ahy16g0843 16 15085633 15088976 Ahy6g0509 6 6180278 6183612 hybridization