Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0839 ATGATGCCTCTGCATGAGTTGTACCGCAAGGCCAAGGAGAAGCTTGATTGTTCTAAAGAGATCAATAGCACAAGTGCACCTGATCATTCAACCGCACCAGAGAGTGATTTCTATGAACTTGTTTGGGAAAATGGTCAGATTTCAATGCAGGGTCAGTCAAGTAGTAGAGGTAGAAAGATTCCAACTTGTAAGAGTTTAACATCTCATTGTCCCAAGGGTCTTCAACATAGGGATGTAGTGGGATATGGTAATGGTACAAATAATGTTAATATGATGAGGATGGGGAAGTTTGGGGATTCAGAAAGTGGACTCAATGAGATTAGAATGCCGGCTCCATCTGCTGAAGACGAAGACGTGATACATTGGTTGAATTATGGAATGGATGAATCTTTGCCACATGACTATGGTTCTGATTTCATACATGAACTCTCTGGGGTCACCATGCATGAAATCCCTCCCTTAAATAACCTCTCTTTGTTGGACAAAAGAAGCAATTCCAATCAGGTACTTAGGGACTCTCACAAGAACTATGCGCGCCATGCTTTTGGTTCAGAACAAGGGATCCTTAACAAGGACTTTTCGGTTATGGCTAGAGGAGAGATTGAGATCCCTGGACCCAAACCTAGCACAAGTCAATTTTGCCAACCATCATCATATCAATGTCAAGGATCATTTGCATCTGTTAGGTCCAAAGCATCAGAAATAACCGAGAATAATGGTAGTAACCCTGCTCATCAAGTACCTTGTGGGGAACTGACTCAGATTTTCCCATCTGCTTCAAGTGGTTTTTCTGGGTTAAAGTTGGATAAGCAAGATCAGGTTATGTGCAGCAGTAGTTCCACTATAATGAACTTCTCCCATTTTGCTAGACCTGCTGCTATTGTGAAAGCTAATCTTCAGAACATTGGGTTGTCTTCATCAAGATCAGATGGTATTGAAAACAAAAAGAAAGATGCTTCTGCGACCGCAAGCAATCCTCCTGAATCAACAAAAGCTGGTTTTAGTGGCGAACGTCAGAAACAATCCGCTGTGCATGAGCTGAAGGTTGTAGAGCCTTCTAAGGCTGATTTGAAGCAATTGGAGCCCTCTAAGGCTGATTTGAAGCAATTGGAGCCAAAATCTCTTGAAGTGAATGCCACTGTTTTGAGGCAATCTGATCCTGCTCGAAAAGAAGACGTGTCAAAGATTTATCAAAGTTCCAATCTACTTCTTTGTGAAAGTACCAATAAAGGAGAGGAAGCTGTTGTAAAAAATATGGAGCCTGCAGTAGCCTCTTCATCCGTTTGCTCTGGCAATGGCGCAGAGAGAATTTCGGGCAACCCAAACCAAAGTTTGAAGCGAAAAAGACAAGAAACTGAGGACTCTGAGTGCCACAGTGAAGATGTTGAGGAAGAATCAGTGGATGTTAAAAAGGCAGGTCCAACACGAGGTGTTAAGAGAAGTCGTTCAGCCGAAGTACATAATCTATCTGAAAGGAGGCGAAGAGACAGGATCAATGAGAAGATGCGTGCATTGCAAGATCTCATACCAAACTGCAATAAGGTGGACAAAGCTTCAATGCTGGATGAGGCAATCGAGTATCTCAAAACACTTCAACTCCAAGTTCAAATTATGTCAATGGGAGCTGGTTTGTATATGCCTACAATGATGTTACCTGCAGGAATGCAGCACATGCATCCACCGATGGCTTCCTTTTCTCCGATGGGCGTTGGCATGCAGATGGGGTTGGGAATGGGTTATGGAATGGGTATGCCTGACATGAATGGTGGACCTTCTAGATTCCCAATGGTTCAGGTGCCCCAAATGCACAGAACTCATCCTCCGGCTGCACCTATGCCTGGACCCTCTGCATTACATGGGATGGGAAGATCAAATCCTCCAGTGTTTGGCCTGCCTAGCCAGGGACTTCCAATTCCAACTATGCCGCGTGCTCCAATGTTTTCTTATCAGGGAGAGCCTGTTGCAAACTCACCAGCCTTACGACCAAATGCTTGTGGAACAGCAGGACTTACGGAAACTGAGAATCCAGCTTCAGCATCTAACCAAAAGGATCCAGTGCCAATTATGCAGAACACCAATGGTTGTAACTCGACGAGTCAGACTACGAAACAGTGTGAAGCAGCAGCAGCCGGCAGAGCTGTGGATGCCACGAAAAAAGATAACCTTGTGACTGATAAATTCGACTAG 2187 0.4426 MMPLHELYRKAKEKLDCSKEINSTSAPDHSTAPESDFYELVWENGQISMQGQSSSRGRKIPTCKSLTSHCPKGLQHRDVVGYGNGTNNVNMMRMGKFGDSESGLNEIRMPAPSAEDEDVIHWLNYGMDESLPHDYGSDFIHELSGVTMHEIPPLNNLSLLDKRSNSNQVLRDSHKNYARHAFGSEQGILNKDFSVMARGEIEIPGPKPSTSQFCQPSSYQCQGSFASVRSKASEITENNGSNPAHQVPCGELTQIFPSASSGFSGLKLDKQDQVMCSSSSTIMNFSHFARPAAIVKANLQNIGLSSSRSDGIENKKKDASATASNPPESTKAGFSGERQKQSAVHELKVVEPSKADLKQLEPSKADLKQLEPKSLEVNATVLRQSDPARKEDVSKIYQSSNLLLCESTNKGEEAVVKNMEPAVASSSVCSGNGAERISGNPNQSLKRKRQETEDSECHSEDVEEESVDVKKAGPTRGVKRSRSAEVHNLSERRRRDRINEKMRALQDLIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPTMMLPAGMQHMHPPMASFSPMGVGMQMGLGMGYGMGMPDMNGGPSRFPMVQVPQMHRTHPPAAPMPGPSALHGMGRSNPPVFGLPSQGLPIPTMPRAPMFSYQGEPVANSPALRPNACGTAGLTETENPASASNQKDPVPIMQNTNGCNSTSQTTKQCEAAAAGRAVDATKKDNLVTDKFD* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0839 728 MobiDBLite consensus disorder prediction 318 337 - -
Ahy16g0839 728 Gene3D - 478 540 IPR036638 GO:0046983
Ahy16g0839 728 MobiDBLite consensus disorder prediction 425 445 - -
Ahy16g0839 728 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 485 555 IPR036638 GO:0046983
Ahy16g0839 728 MobiDBLite consensus disorder prediction 709 728 - -
Ahy16g0839 728 Pfam Helix-loop-helix DNA-binding domain 486 532 IPR011598 GO:0046983
Ahy16g0839 728 MobiDBLite consensus disorder prediction 668 699 - -
Ahy16g0839 728 CDD bHLH_AtPIF_like 482 544 - -
Ahy16g0839 728 MobiDBLite consensus disorder prediction 425 495 - -
Ahy16g0839 728 MobiDBLite consensus disorder prediction 463 495 - -
Ahy16g0839 728 Coils Coil 445 465 - -
Ahy16g0839 728 MobiDBLite consensus disorder prediction 661 699 - -
Ahy16g0839 728 PANTHER TRANSCRIPTION FACTOR PIF3 2 701 IPR044273 GO:0003700|GO:0006355
Ahy16g0839 728 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 482 531 IPR011598 GO:0046983
Ahy16g0839 728 SMART finulus 488 537 IPR011598 GO:0046983
Ahy16g0839 728 MobiDBLite consensus disorder prediction 305 344 - -
Ahy16g0839 728 PANTHER TRANSCRIPTION FACTOR PIF3 2 701 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0839 Ahy-Chr16 15026852 15031347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0839 2 613 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 34.236 5.87e-65 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy16g0839 HLH 5.60E-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0839 K12126 - gmx:100794974 694.886