Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0837 ATGGGGAAACTTTTCTGGCTTGCCATTGCGATTGCGATAGGACTTGTTTTAAGCAACTGGGTTCATGGCTTTCAAGGATATGAATATCACCACTTGAATGAAACAGAACCCTCATTGCTGGAGGCTCATGAATCATCTTTGTTTCAGAGCAATACTCTCTTCGTGGGACTCACCCTTATTCATACTGCAGCTGCCAAAGGAGCAGTGTGCTTGGATGGATCTTTACCTGCTTATCATTTGCATCGGGGTTATGGATCAGGAGCAAACAGCTGGCTTATTAATTTAGAGGGAGGTGGATGGTGTAACAGCATTAGAACATGTGTTTATCGCAAGAGAACACGGCGTGGATCATCCACATTTATGGAAAAGGAGATTCCTTTTACGGGAATACTGAGCAACAAAGCTGAAGAAAACCCAGATTTTTTCAATTGGAACAGAGTAAAGATTCGTTATTGTGATGGAGCATCATTTACCGGTGATAGTGAAGACAAGACAGCAGACCTACAATTCAGAGGACAGAGGATTTGGGCAGCCGCAATAGAAGATTTGATGTCCCAGGGAATGCGCTTTGCCGAGCAGGCTCTTCTCTCCGGATGCTCTGCTGGTGGCTTGGCTACTATCATACACTGCGACGAATTTCGCAACCTCTTTCCTAGGACCACCAGAGTGAAGTGTCTTAGTGATGCCGGATTGTTTCTTGATGCAATTGATATATCTGGTGGCCATACCCTCAGAAATTTCTACACCGGTGTCGTAGGATTGCAGGGAGCACAGAAGAATTTGCCCGAGATATGTACTAATCATCTTGACCCCACATCGTGCTTCTTCCCCCAGAACTTGATTGCGAGTGTTAGAACCCCGCTATTCATTCTCAATGCTGCTTATGATTCATGGCAGATCCAATCGAGTATAGCGCCTCCATCAGCAGATCCACATGGATATTGGCATGATTGCAGATTAAACTATGCTAAATGTACTACATCACAGATCCAATTTCTTCAAGGATTCAGGATTCACATGCTGAACATTATAAAAGAGTTCTCAAGATCATACAAGAATGGATTGTTCATCAATTCATGTTTCTCTCACTGCCAATCTGAGAGGCAGGACACATGGTTCGCTGAAAATTCTCCAATCGTGAAGAACAAGGTAATTGCTGTGGCTGTTGGAGATTGGTATTTCGACCGCGCAGGTGTGAAGGTGATTGATTGTCCTTACCCTTGTGATAATACCTGTCACCATCTCGTATTCAGATCATGA 1260 0.4397 MGKLFWLAIAIAIGLVLSNWVHGFQGYEYHHLNETEPSLLEAHESSLFQSNTLFVGLTLIHTAAAKGAVCLDGSLPAYHLHRGYGSGANSWLINLEGGGWCNSIRTCVYRKRTRRGSSTFMEKEIPFTGILSNKAEENPDFFNWNRVKIRYCDGASFTGDSEDKTADLQFRGQRIWAAAIEDLMSQGMRFAEQALLSGCSAGGLATIIHCDEFRNLFPRTTRVKCLSDAGLFLDAIDISGGHTLRNFYTGVVGLQGAQKNLPEICTNHLDPTSCFFPQNLIASVRTPLFILNAAYDSWQIQSSIAPPSADPHGYWHDCRLNYAKCTTSQIQFLQGFRIHMLNIIKEFSRSYKNGLFINSCFSHCQSERQDTWFAENSPIVKNKVIAVAVGDWYFDRAGVKVIDCPYPCDNTCHHLVFRS* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0837 419 PANTHER NOTUM-RELATED 5 417 IPR004963 GO:0016787
Ahy16g0837 419 Pfam Pectinacetylesterase 49 397 IPR004963 GO:0016787
Ahy16g0837 419 PANTHER PECTIN ACETYLESTERASE 5 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0837 Ahy-Chr16 14970929 14974724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0837 1 418 Carbohydrate Esterase AT1G57590 67.542 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0837 K19882 - gmx:100782401 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0837 16 14970929 14974724 Ahy16g0807 16 14417966 14422556 ECH
Ahy16g0837 16 14970929 14974724 Ahy19g1285 19 25884000 25888282 ECH
Ahy16g0837 16 14970929 14974724 Ahy16g0837 16 14970929 14974724 ECH
Ahy16g0837 16 14970929 14974724 Ahy6g0515 6 6276287 6279968 hybridization
Ahy16g0837 16 14970929 14974724 Ahy19g1316 19 27090740 27095461 PCT
Ahy16g0837 16 14970929 14974724 Ahy9g1045 9 21080573 21084953 PCT
Ahy19g1316 19 27090740 27095461 Ahy16g0837 16 14970929 14974724 PCT
Ahy9g1045 9 21080573 21084953 Ahy16g0837 16 14970929 14974724 PCT