Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0828 ATGTTGGTGTTGCAATTTGTTCATTACCATTTTCACCCAAATCCTCCCTCACCGCCACTCTCATCCCCAACCACCACCACCACTAACATTATCACCATCAAAACCATCCCTTTCTCTTTTTATGCTGCCCTATACACCAGCGAACTCAACGACATTTCTCACCGTTCATCTTCACGCCGCGACGGTGCCATTTGCTGCTTCGAATTCGAAGAAGATGATTATGTTCGAACCTTGCCTCTTTGCTCACAAACCTTCCATGTTGATTACATCGATGCTTGGCTTCGTTCCCACACAAGCTGTCCTCTCTGCCGCGCTGGGGTTCTCTCTGTCGCTTTGCTGTTTGCTCCCATGTTTGCTGCCAGGATCCGACAAAATCTTGACGCCGACGAATATGGCTCGAAATCAGCAGGGGAAGTAAAGGATTGGACCCTAGTTGCAAGGAGAAGAATTCGATTCGGTCGAAGGGGAGTGGAGCGCGGTAGATTTCGATAG 492 0.4898 MLVLQFVHYHFHPNPPSPPLSSPTTTTTNIITIKTIPFSFYAALYTSELNDISHRSSSRRDGAICCFEFEEDDYVRTLPLCSQTFHVDYIDAWLRSHTSCPLCRAGVLSVALLFAPMFAARIRQNLDADEYGSKSAGEVKDWTLVARRRIRFGRRGVERGRFR* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0828 163 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 32 128 IPR044675 -
Ahy16g0828 163 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 32 128 - -
Ahy16g0828 163 SUPERFAMILY RING/U-box 63 109 - -
Ahy16g0828 163 Pfam Ring finger domain 64 104 IPR001841 -
Ahy16g0828 163 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 26 108 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0828 Ahy-Chr16 14882921 14884085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0828 33 146 C3H Transcription Factor Family AT3G18930 43.651 2.61e-25 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0828 - K19041 ahf:112756727 267.7