Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy16g0825 | ATGGCTTCTTTGATTGGAGTTTCTTCCATATACCAAACTCCCTCTACAACTCTCGACCTACACAAACGACCACCGCTTACTACTACTACTTCTTCTTCCTCTCTTTCCTTGCAATGCTTGGACAGCAAGTCCCACTTCAACAACGTTCGCAGAGCACACCTTTCTACTAACAATGGCAAGGGAGGTTTTAAGCCCACTGTTAGTTTTGTTACTTCTGCCATTGCCACTCCAAATTCTTCGGTCCTCAGCGAAGAAGCATTCAAGGGGATAGGCAGCGGTGATGACTTCCCCGACGACGATGACTTTGCCGGCTTTGGCTCTGAAACCGACGAGGGATCTTCTGCTGTTAGCTCTGAAGAACTCGACGTTTCCAAGCTTGGCCTTCCTTCGCGCCTCGTTGATTCCCTCCTCAAGCGTGGGATTTCGCATCTTTTCCCCATTCAGAGAGCGGTGTTGGTACCGGCATTGGAAGGTAGGGATATCATTGCTCGGGCAAAGACTGGGACTGGCAAGACACTAGCATTTGGGATTCCCATTATTAAAGGCCTTACTGAAGATGAACATTCAAGTTCTCTCAGGCGGTCTGGTCGCCTCCCCAGAGTGTTGGTTCTTGCACCTACCAGGGAGTTAGCAAAGCAAGTAGAGAAGGAGATAAAGGAATCTGCACCTTATCTGAGCACAGTTTGTGTTTACGGGGGTGTTTCCTATGTTACTCAACAAAGTGCGCTTTCACGTGGAGTTGATGTAGTTGTTGGGACGCCTGGTAGAATAATTGACCTAATCAATGGGAACAGCCTTAGACTGAATGAAGTTCAGTACCTGGTCCTCGATGAAGCGGATCAGATGCTTGCTGTTGGGTTTGAGGAGGATGTGGAAGTAATATTGGAAAAGCTCCCATCAGAGAGGCAGAGCATGCTTTTTTCTGCAACTATGCCAAGTTGGGTAAAGAAATTGGCTCGAAAGTATTTGGACAATCCATTGACAATAGATCTGGTTGGCGATGAAGAAGAAAAGCTCGCAGAAGGGATAAAACTTTTTGCTATATCAGCAACTGCCACTTCAAAGCGAACAATTCTTTCCGATCTTATAAGTGTTTATGCTAAGGGTGGGAAGACTATAGTTTTTACGCAGACAAAAAGAGATGCTGATGAAGTATCATTGGCATTAACAAATAGTATAATGTCTGAAGCATTACATGGTGATATATCTCAGCATCAAAGAGAGAGAACATTGAATGGTTTTCGACAAGGAAAATTTACAGTTCTTGTTGCCACTGATGTTGCAGCCCGTGGACTTGATATTCCTAATGTTGATTTGATTATTCATTATGAGCTTCCCAATGATCCGGAGACTTTTGTGCATCGCTCTGGTCGTACTGGGCGTGCAGGGAAACAAGGTACTGCTATTCTTATGTACACCAGTAGCCAGAGGAGAACAGTTAGATCTCTAGAGCGTGATGTAGGCTGCAAATTTGAATTCATCAGTCCACCCGGTATACAAGAGATTTTGGAGGCATCTGCTGAGCAAGTTGTTGCCACGCTCAATAGGGTTCATCCCGAGTCTGTTGAGTTTTTTACACCAACTGCACAAAAATTGATTGAAGAACAGGGAACAAGTGCCCTTGCAGCTGCACTAGCACAAATGAGTGGATTCTCTCGTCCTCCATCGTCCCGATCTTTAATCAACCATGAACAGGGATGGGTTACATTGCAGTTGATCCGAGATTCAGATAGTAGAAGATACTTCTCCGCAAGATCAGTCACTGGGTTTCTGGCTGAGGTTTATTCTCCAGCTGCTGATGAAGTTGGAAAAATACATTTAATTGCAGATGAAAGGGTTCAAGGGGCTGTTTTCGATCTTCCAGAGGAAATTGCTAAAGAGTTACTTAACAGGGAGATACCACCTGGAAACACTATAACCAAGGTTACCAAGTTGCCTGCCTTGCAAGATGATGGGCCACCAGGTGATTTCTATGGGAAGTTCTCTGACAGAGATCGTAGTAGCCGAAGAGGTTCAGGTTCTGGTTCTAGGGATCGGAGAGGCGGTTTTAGAAGCTCACGGGGATATGGAGGCCGAGACTCTGATGATGATTTTGGTGATTCATATAGGAGAGGCAGTAGAAGTAATAATAAAACTGGCAGTAGCTGGTCTCGAGCTGGAAGATCCAGTGGTGATGATTGGCCAATTGGCGGTAGACGATCATCAGGCAGATCTTCATCGTCAGACAGAGGTGGTTTTGGAGGGTCCTGTTTTAATTGTGGGGAGTCTGGGCATCGAGCATCAGATTGTCCAAACAAGCGCAGCTTCTTTTAG | 2313 | 0.4548 | MASLIGVSSIYQTPSTTLDLHKRPPLTTTTSSSSLSLQCLDSKSHFNNVRRAHLSTNNGKGGFKPTVSFVTSAIATPNSSVLSEEAFKGIGSGDDFPDDDDFAGFGSETDEGSSAVSSEELDVSKLGLPSRLVDSLLKRGISHLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPIIKGLTEDEHSSSLRRSGRLPRVLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYVTQQSALSRGVDVVVGTPGRIIDLINGNSLRLNEVQYLVLDEADQMLAVGFEEDVEVILEKLPSERQSMLFSATMPSWVKKLARKYLDNPLTIDLVGDEEEKLAEGIKLFAISATATSKRTILSDLISVYAKGGKTIVFTQTKRDADEVSLALTNSIMSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKQGTAILMYTSSQRRTVRSLERDVGCKFEFISPPGIQEILEASAEQVVATLNRVHPESVEFFTPTAQKLIEEQGTSALAAALAQMSGFSRPPSSRSLINHEQGWVTLQLIRDSDSRRYFSARSVTGFLAEVYSPAADEVGKIHLIADERVQGAVFDLPEEIAKELLNREIPPGNTITKVTKLPALQDDGPPGDFYGKFSDRDRSSRRGSGSGSRDRRGGFRSSRGYGGRDSDDDFGDSYRRGSRSNNKTGSSWSRAGRSSGDDWPIGGRRSSGRSSSSDRGGFGGSCFNCGESGHRASDCPNKRSFF* | 771 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy16g0825 | 770 | MobiDBLite | consensus disorder prediction | 657 | 704 | - | - | |
Ahy16g0825 | 770 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 358 | 518 | IPR001650 | - | |
Ahy16g0825 | 770 | MobiDBLite | consensus disorder prediction | 636 | 746 | - | - | |
Ahy16g0825 | 770 | CDD | DEADc | 132 | 330 | - | - | |
Ahy16g0825 | 770 | SUPERFAMILY | Retrovirus zinc finger-like domains | 731 | 768 | IPR036875 | GO:0003676|GO:0008270 | |
Ahy16g0825 | 770 | Pfam | Zinc knuckle | 749 | 765 | IPR001878 | GO:0003676|GO:0008270 | |
Ahy16g0825 | 770 | PANTHER | - | 65 | 761 | - | - | |
Ahy16g0825 | 770 | Pfam | GUCT (NUC152) domain | 550 | 649 | IPR012562 | GO:0003723|GO:0004386|GO:0005524 | |
Ahy16g0825 | 770 | Gene3D | - | 106 | 332 | IPR027417 | - | |
Ahy16g0825 | 770 | SMART | ultradead3 | 140 | 346 | IPR014001 | - | |
Ahy16g0825 | 770 | MobiDBLite | consensus disorder prediction | 99 | 120 | - | - | |
Ahy16g0825 | 770 | PANTHER | ATP-DEPENDENT RNA HELICASE RHLE-RELATED | 65 | 761 | - | - | |
Ahy16g0825 | 770 | Gene3D | - | 347 | 550 | IPR027417 | - | |
Ahy16g0825 | 770 | MobiDBLite | consensus disorder prediction | 705 | 721 | - | - | |
Ahy16g0825 | 770 | Pfam | DEAD/DEAH box helicase | 145 | 318 | IPR011545 | GO:0003676|GO:0005524 | |
Ahy16g0825 | 770 | Gene3D | - | 739 | 768 | - | - | |
Ahy16g0825 | 770 | SMART | c2hcfinal6 | 749 | 765 | IPR001878 | GO:0003676|GO:0008270 | |
Ahy16g0825 | 770 | CDD | SF2_C_DEAD | 343 | 472 | - | - | |
Ahy16g0825 | 770 | CDD | GUCT_Hera | 557 | 629 | - | - | |
Ahy16g0825 | 770 | SMART | helicmild6 | 383 | 463 | IPR001650 | - | |
Ahy16g0825 | 770 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 152 | 329 | IPR014001 | - | |
Ahy16g0825 | 770 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 199 | 484 | IPR027417 | - | |
Ahy16g0825 | 770 | Pfam | Helicase conserved C-terminal domain | 356 | 463 | IPR001650 | - | |
Ahy16g0825 | 770 | ProSiteProfiles | Zinc finger CCHC-type profile. | 750 | 765 | IPR001878 | GO:0003676|GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy16g0825 | Ahy-Chr16 | 14864733 | 14869705 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy16g0825 | 147 | 485 | Eukaryotic Initiation Factors Gene Family | AT1G72730 | 39.368 | 4.35e-65 | 221 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy16g0825 | - | - | gmx:100779706 | 1124.77 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy16g0825 | 16 | 14864733 | 14869705 | Ahy19g1302 | 19 | 26418312 | 26425203 | ECH | |
Ahy16g0825 | 16 | 14864733 | 14869705 | Ahy16g0825 | 16 | 14864733 | 14869705 | ECH | |
Ahy16g0825 | 16 | 14864733 | 14869705 | Ahy6g0522 | 6 | 6373627 | 6378728 | hybridization | |
Ahy16g0825 | 16 | 14864733 | 14869705 | Ahy19g1302 | 19 | 26418312 | 26425203 | PCT | |
Ahy19g1302 | 19 | 26418312 | 26425203 | Ahy16g0825 | 16 | 14864733 | 14869705 | PCT |