Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0809 ATGGCTTCTTTATTTTCAATGCAGTTGACCCATACCCACAACCGTCTTCCATGGTTTCGCCATATCCAGGTTGTAGAGCTGCAAGCCAAAGTGACAAACAAGTGCTACTTTGATGTAGAAGTTGGGGGTGAACCTGTCGGCAGGATTGTTTTGGGCCTATTTGGAGAGATCGCTCCTAAAACAGTTGAGAACTTTCGTGCTTTGTGCACAGGAGAGAAAGGATATGGCTACAAAGGATGCTCCTTCCATCGTATAATCAAAGAATTCATGATTCAAGGAGGGGACTTTACTGAAGGAGATGGAACTGGTGGAATTAGCATCTATGGTCCCAGTTTTAAAGATGAGAGTTTTGCCTTGAAGCATGTTGGTCCTGGGGTTTTGAGCATGGCAAATGCTGGTCCTAACACCAATAGTAGTCAATTTTTTATCTGCACGGTAAAGACTCCTTGGCTAGACAATCGTCACGTGGTTTTTGGACACGTCATTGATGGAATGGATGTTGTGAAGACACTTGAATCCCAAGAGACAAGCAGAATGGATATCCCTCGGAAGCCTTGCAGAATTGTTAACTGCGGTGAGCTTCCTTTAGACGGTTGA 597 0.4439 MASLFSMQLTHTHNRLPWFRHIQVVELQAKVTNKCYFDVEVGGEPVGRIVLGLFGEIAPKTVENFRALCTGEKGYGYKGCSFHRIIKEFMIQGGDFTEGDGTGGISIYGPSFKDESFALKHVGPGVLSMANAGPNTNSSQFFICTVKTPWLDNRHVVFGHVIDGMDVVKTLESQETSRMDIPRKPCRIVNCGELPLDG* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0809 198 PIRSF Peptidylpro_ismrse 22 197 IPR024936 GO:0003755
Ahy16g0809 198 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 37 192 IPR002130 GO:0000413|GO:0003755
Ahy16g0809 198 CDD cyclophilin_ABH_like 34 192 - -
Ahy16g0809 198 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP20-3, CHLOROPLASTIC 23 197 - -
Ahy16g0809 198 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 53 68 IPR002130 GO:0000413|GO:0003755
Ahy16g0809 198 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 82 94 IPR002130 GO:0000413|GO:0003755
Ahy16g0809 198 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 140 152 IPR002130 GO:0000413|GO:0003755
Ahy16g0809 198 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 153 168 IPR002130 GO:0000413|GO:0003755
Ahy16g0809 198 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 125 140 IPR002130 GO:0000413|GO:0003755
Ahy16g0809 198 Gene3D - 22 197 IPR029000 -
Ahy16g0809 198 SUPERFAMILY Cyclophilin-like 29 194 IPR029000 -
Ahy16g0809 198 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 77 94 IPR020892 GO:0003755|GO:0006457
Ahy16g0809 198 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 36 193 IPR002130 GO:0000413|GO:0003755
Ahy16g0809 198 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 23 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0809 Ahy-Chr16 14440325 14443034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0809 47 191 U-box Gene Family AT5G67530 45.205 7.73e-31 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0809 K03768 - gmx:100785805 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0809 16 14440325 14443034 Ahy6g0536 6 6564515 6567250 hybridization