Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0802 ATGGGAAGACACTCTTGCTGTTACAAGCAGAAGCTTCGGAAGGGTCTATGGTCTCCTGAAGAGGATGAAAAGCTTCTGAGGCATATCACTAAGTACGGTCATGGATGTTGGAGCTCTGTTCCTAAGCAAGCAGGTTTGCAGAGGTGTGGTAAGAGTTGCAGGCTTAGGTGGATCAATTACTTAAGGCCTGATTTAAAGAGAGGTACATTTTCTCAGGAGGAAGAAAATCTCATCATTGAACTTCATGCTGTGTTAGGGAATAGATGGTCTCAGATTGCGGCGCAGCTTCCGGGGAGGACAGACAATGAAATCAAGAATCTGTGGAATTCATGCTTGAAGAAGAAGCTGAGGCAAAGAGGCATAGACCCTGTTACACACAAGCCATTATCTGAATTGTCAGAGGAGAAGAGCCAGATACAAGAGAAAGCATTGTCCAATGATAATGAATTGAACTTGTTGAGATCAGAGAGTTCCAATAAGTCTGATGGAGCTTCTTCCTATGATCATCAACAACAACAACAACAACAACAACAACAAGGATTTGTTCCAACATCAGAGATGGAAGGTTCTTCTTCCACTAACAAGGACATTTTCCTTGACACTACAACAAGGTTCATGGCTAACACTTGCTCAGATTTTATGGGCAACTACAACATGAGTTATGCATCATCATCTTCCAATGTCACTGTCACCGACAACAATTGGTTCACACAAACATCAAGGCCTTCTTTTGATATCAACTCAGATTTCACCTCATCATCATCATTCCTACCTGGTTCCTTTTGCTACAAGCCAGAATCTCTCAAGAACACCAACATGCTTTCTTCTTCTTCTTCTTCATGGGGATTGATCACAGATTGCAGCATGGAAGAAGCAGAAGAGGCAAAGTGGTCTGAGTATCTTCACAATCAAATGTTGATGCTTGCAGCTGTTCAGAACAACAACAACAACAACAACAACAACAACCAAGCTTCTTTATGCAATGAGATAAAGCCTCTTCCTTCAACCACCACAGTAACAACAACACCACCACCACATTTGGTTCCTGATACTTTAGGGGCTATCATGTTACCTCATTCCAAGAATCAACATCACCATACATCACAAACTTCTTCTACCACCACCTTTTCCAAGGATATCCAGAACCTAACAGCAGCCTTTGGACATATATAA 1173 0.4186 MGRHSCCYKQKLRKGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRGIDPVTHKPLSELSEEKSQIQEKALSNDNELNLLRSESSNKSDGASSYDHQQQQQQQQQQGFVPTSEMEGSSSTNKDIFLDTTTRFMANTCSDFMGNYNMSYASSSSNVTVTDNNWFTQTSRPSFDINSDFTSSSSFLPGSFCYKPESLKNTNMLSSSSSSWGLITDCSMEEAEEAKWSEYLHNQMLMLAAVQNNNNNNNNNNQASLCNEIKPLPSTTTVTTTPPPHLVPDTLGAIMLPHSKNQHHHTSQTSSTTTFSKDIQNLTAAFGHI* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0802 390 MobiDBLite consensus disorder prediction 127 194 - -
Ahy16g0802 390 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Ahy16g0802 390 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Ahy16g0802 390 CDD SANT 17 61 IPR001005 -
Ahy16g0802 390 PANTHER MYB DOMAIN PROTEIN 55 1 336 - -
Ahy16g0802 390 SMART sant 13 63 IPR001005 -
Ahy16g0802 390 SMART sant 66 114 IPR001005 -
Ahy16g0802 390 Gene3D - 11 67 - -
Ahy16g0802 390 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Ahy16g0802 390 MobiDBLite consensus disorder prediction 143 194 - -
Ahy16g0802 390 Gene3D - 68 148 - -
Ahy16g0802 390 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Ahy16g0802 390 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Ahy16g0802 390 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Ahy16g0802 390 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Ahy16g0802 390 PANTHER MYB DOMAIN PROTEIN 55 1 336 - -
Ahy16g0802 390 CDD SANT 69 109 IPR001005 -
Ahy16g0802 390 MobiDBLite consensus disorder prediction 127 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0802 Ahy-Chr16 14366514 14368683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0802 1 143 MYB Transcription Factor Family AT4G01680 87.671 7.96e-93 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy16g0802 Myb_DNA-binding 1.80E-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0802 K09422 - gmx:100819449 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0838 16 15018511 15020057 Ahy16g0802 16 14366514 14368683 ECH
Ahy19g1283 19 25755740 25757847 Ahy16g0802 16 14366514 14368683 ECH
Ahy16g0802 16 14366514 14368683 Ahy16g0802 16 14366514 14368683 ECH
Ahy16g0802 16 14366514 14368683 Ahy6g0540 6 6616143 6618358 hybridization
Ahy16g0802 16 14366514 14368683 Ahy19g1283 19 25755740 25757847 PCT
Ahy16g0802 16 14366514 14368683 Ahy9g1011 9 20006077 20008438 PCT
Ahy19g1283 19 25755740 25757847 Ahy16g0802 16 14366514 14368683 PCT
Ahy9g1011 9 20006077 20008438 Ahy16g0802 16 14366514 14368683 PCT