Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0794 ATGATAAGTGGAGAAAAAGCTGTGGAGGGAGATGGAAGGGCGAAAGTAGAGATGAAGAATAACGATGCTTCGGTGTCTGGTGATGAAAAGAGAGAAAGAGAGGTATCAGCATCAAACAATAATGGTAATAATGCAGAGGAAGTAATGTCAAAGAAGCATGATGAGAATGATGATCATAATGAAGATGATGAAGATCGTTTGACTAAGCTTCATTTGGGAAAGCAAGTAGCAGCATCTGCTACAGAAGAAGACGTCCTTGAGCGATCTTCTTCTCAGAGTTGGGGATCATGCAAGACTCCCAACTTAGAAGAAACCAAGCTTCCTTCTTCTGACCTTCCTTTCAGGAAAGCCAGGGTTTCAGTGCGCGCAAGATCAGAAGCTCCTCTGATTAGCGATGGATGCCAGTGGAGGAAATACGGACAAAAAATGGCTAAAGGTAACCCCAGTCCTCGAGCCTACTATCGGTGCACCATGGCTGCTGGATGCCCAGTTCGGAAGCAGGTTCAAAGATGCGCAGAGGACAGTACAGTCCTAATAACAACCTATGAAGGTAACCACAACCACCCTCTTCCGCCGGCAGCCACCGCCATGGCAAACACGACTTCAGCCGCAGCAGCCATGCTACTATCAGGATCAACCTCATCATCGTCGAAAGAAACCCTAGCAGCTTCAGCAGGATACTTCTCTTCATCAATGCCCTACACATCAATGGCGACGCTATCAGCTTCCGCGCCATTTCCCACCATCACTCTCGACCTCACACACAACCACCACAACGCACTCCAACTCCACCGTGTGGTCCCTCCTCCCGGTGTTACCTTCCCTCTCCCATTGCATGCAGTTACTCCTCCACATCAGCTTATAGCAGGGCACCCTTTCTTAATCTCTCACCACCAGAAGCTGATGCCTCCTTTGGTTCATCGACAACAACCACAGCCTTCCAATAATTCCCCGTCTATGGTGGAGACAGTGAGTGCAGCCATTGCTTCGGATCCAAACTTCACTGCGGCCGTGGCTGCGGCACTCTCATCAATCATTGGAAGCAGTAACAATGGTGGAAGTGCAAGTACCGTTATTCACCCTAATGCTATTTCTGTTTCACCGAATGGATCACCGCAACTTCCTCAGTCATGTACTACATACTCTACCAACTAG 1155 0.4857 MISGEKAVEGDGRAKVEMKNNDASVSGDEKREREVSASNNNGNNAEEVMSKKHDENDDHNEDDEDRLTKLHLGKQVAASATEEDVLERSSSQSWGSCKTPNLEETKLPSSDLPFRKARVSVRARSEAPLISDGCQWRKYGQKMAKGNPSPRAYYRCTMAAGCPVRKQVQRCAEDSTVLITTYEGNHNHPLPPAATAMANTTSAAAAMLLSGSTSSSSKETLAASAGYFSSSMPYTSMATLSASAPFPTITLDLTHNHHNALQLHRVVPPPGVTFPLPLHAVTPPHQLIAGHPFLISHHQKLMPPLVHRQQPQPSNNSPSMVETVSAAIASDPNFTAAVAAALSSIIGSSNNGGSASTVIHPNAISVSPNGSPQLPQSCTTYSTN* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0794 384 SUPERFAMILY WRKY DNA-binding domain 123 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy16g0794 384 MobiDBLite consensus disorder prediction 47 71 - -
Ahy16g0794 384 Pfam WRKY DNA -binding domain 132 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy16g0794 384 MobiDBLite consensus disorder prediction 365 384 - -
Ahy16g0794 384 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 15 383 IPR044810 GO:0003700
Ahy16g0794 384 MobiDBLite consensus disorder prediction 84 106 - -
Ahy16g0794 384 MobiDBLite consensus disorder prediction 8 36 - -
Ahy16g0794 384 ProSiteProfiles WRKY domain profile. 125 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy16g0794 384 Gene3D WRKY domain 115 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy16g0794 384 SMART WRKY_cls 130 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy16g0794 384 MobiDBLite consensus disorder prediction 1 109 - -
Ahy16g0794 384 PANTHER WRKY TRANSCRIPTION FACTOR 47-RELATED 15 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0794 Ahy-Chr16 14216173 14217899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0794 98 384 WRKY Transcription Factor Family AT4G01720 57.239 7.00e-76 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy16g0794 WRKY 5.10E-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0794 - - gmx:100783661 366.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0794 16 14216173 14217899 Ahy6g0546 6 6719257 6722264 hybridization