Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0783 ATGGAGAGTGAACCTTTGTTAAGCACCTCCAAAATCATGGACAACCGCGATGTACAATACTTCGGACCTTCAAAATCCTTCAGCGATGTGGTAACCCTGACCCTGCAGAACACAGAGATAGAATCCTTGAATCAACAGCAGCAACAGCCGCCATTGCCAGCTTCTTCGAAGAAGAAGAAACTGAGTCGTTGCAAAACTGCTCCAGCCATGATCACAATGAAAGAAGTGAAAAAGAAAGAAGCGGAAGTTCCAAAACCGCAGAACAGCTCGGTGATCAGACAAGGGCTTATCTTGCTTGTGATATACCTGTCTATTGGAGTTGCCATATACTCCTTCAACAGGGAACGTTTCTCCGGCATTGAAACACACCCTGTGATCGACGCACTCTACTTCTGCATAGTCACCATGTGCACCATAGGGTACGGTGACATAGCTCCTCTGACCCCAGTCACAAAGGTCTTCGCTTGCGTCTTCGTCTTAGTTGGGTTTGGATTCATAGACATACTCTTAAGCGGACTCGTCAACTATGTCTTGGATTTGCAAGAAAACACCATCCTTGCTGGCTTACAAATGGGGTCTCCAATTCATCAGGAACAGCAACAAGAAGCAGGGTTCTCAGCAAGGAATTACATTATTGACGTGGCAAAGGGGAGGATGAGGATAAGATTGAAGGTTGGTTTGGCTCTTGGTGTGGTTGTTCTTTGCATTGGGATTGGGGGTTTTGTGCTCTACTTTGTGGAGGGTTTGGATTGGGTTGATTCCATTTACTTGTCTGTTATGTCTGTTACAACAGTTGGTTATGGTGATAGAGCTTTCAAGACTCGTAAAGGTCGCTTGTTTGCGGCTATTTGGCTCTTGTTTTCGACCTTGATGGTTGCAAGGGCATTCTTGTATTTGGCTGAAGCTAGAATCGATAGAAGGCATAGAAGAATGGCTAAGAAGGTTTTGCATAGAGATATCACTGTTGATGATTGGCTTGCTGCTGATATCAACAACACTGGTTTCATCAGTAAGTCAGAGTATGTAATTTTCAAGCTGAAAGAAATGGGTAAAATACAGGAAAAAGATGTAATGCAAATATGTGACCAATTCAGGAAGCTTGACCCTTCTAACTGTGGCAAGATTACACTTCCTCATCTCTTGGGGGATAACTCATGA 1158 0.4396 MESEPLLSTSKIMDNRDVQYFGPSKSFSDVVTLTLQNTEIESLNQQQQQPPLPASSKKKKLSRCKTAPAMITMKEVKKKEAEVPKPQNSSVIRQGLILLVIYLSIGVAIYSFNRERFSGIETHPVIDALYFCIVTMCTIGYGDIAPLTPVTKVFACVFVLVGFGFIDILLSGLVNYVLDLQENTILAGLQMGSPIHQEQQQEAGFSARNYIIDVAKGRMRIRLKVGLALGVVVLCIGIGGFVLYFVEGLDWVDSIYLSVMSVTTVGYGDRAFKTRKGRLFAAIWLLFSTLMVARAFLYLAEARIDRRHRRMAKKVLHRDITVDDWLAADINNTGFISKSEYVIFKLKEMGKIQEKDVMQICDQFRKLDPSNCGKITLPHLLGDNS* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0783 385 ProSitePatterns EF-hand calcium-binding domain. 329 341 IPR018247 -
Ahy16g0783 385 PRINTS Two pore domain K+ channel signature 134 162 IPR003280 GO:0005267|GO:0016020|GO:0071805
Ahy16g0783 385 PRINTS Two pore domain K+ channel signature 263 272 IPR003280 GO:0005267|GO:0016020|GO:0071805
Ahy16g0783 385 SUPERFAMILY EF-hand 324 379 IPR011992 -
Ahy16g0783 385 SUPERFAMILY Voltage-gated potassium channels 92 181 - -
Ahy16g0783 385 Gene3D - 207 325 - -
Ahy16g0783 385 Gene3D - 69 202 - -
Ahy16g0783 385 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 44 380 IPR003280 GO:0005267|GO:0016020|GO:0071805
Ahy16g0783 385 Pfam Ion channel 232 301 IPR013099 -
Ahy16g0783 385 Pfam Ion channel 97 177 IPR013099 -
Ahy16g0783 385 SUPERFAMILY Voltage-gated potassium channels 215 322 - -
Ahy16g0783 385 PANTHER TWO-PORE POTASSIUM CHANNEL 4-RELATED 44 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0783 Ahy-Chr16 14091265 14093329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0783 56 383 Ion Channels AT4G01840 67.576 5.61e-160 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0783 K05389 - gmx:100801488 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0783 16 14091265 14093329 Ahy6g0554 6 6785982 6788093 hybridization