Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0776 ATGCAAGGAACCGCGCCAATGACTGCTGAGGCCACCACCTCCAAAGGCACCGTGCTGGCTCGGTCGCTCAAGGAGGCTGAAATGCAGTATTCGTCGGCCAAGGTATCAGTGTGGTGGGACATAGAGAACTGCCCTGTGTCTCGTGGCTGCGACGCGCATTCGATCGCAAAGAACATCAGTTCCGCACTGGTTCGCATGAACTACTGCGGCCCCGTCTCCATCTCAGCGTACGGCGACACCAACCGCATTCCATCGTCCGTGCAGCACGCGCTCTCCAGCACCGGCATCTCCCTCAACCACGTCCCCGCAGGTGTGAAAGATGCAAGTGACAAGAAGATTTTAGTTGATATGTTATTCTGGGCGGTGGACAACCCTGCTCCTGCGAATTATTTGCTTATTTCCGGAGATAGGGACTTCTCGAATGCCCTGCATCAGCTGCGCATGAGAAGGTACAACATTCTTCTCGCTCAACCACTAAAAGCTTCGGCGTCCCTCACTGCTGCTGCTAGGAGTGTGTGGCTCTGGACTAGCCTTTCTGCCGGTGGGCCACCACTATCCAGTGGCAGCTCGTCAAACATTGCAAGTAATACCCAAAGCTTTAGTTCTGAAAGGGTTCAAAACCGTGTTTCTGAACCGTCTCAACCAAGATTCAAAGAAAAATACACCAACTGCGATGCAAGCCAATTTCCGGAGAGTAAGACTAAGAACAATCATTGCTCTAATCCGGAACTTCCACAGGCAAAGTTGTTTCCCAGGGCTCCCCATGAATTCTTTTGTAATAAGCCCAACATCGCAACTATTAGTTCTGCACTTAGTCTTCCAAGCCACCAAGACCACTCAAAAAGCAGTGGTAGTAACTCTAGTGGTGGAATTCCTCATGATTCACAGAATAGCTTTTTGAGGCAAAACAACCTCCATGATCATCAGGAATCTAGACAAGATTATAGAATAAGTACTAGTCAGTCGCCTAATGTTGTCAGCTTAACTACATCAACAGAGCATAATCCACATGCCAGCCAAGCATCGTGTTATGAGAATGTGGACAAGGGGTCTTCTCGTAATTGTGAACAGTCTAAAACTTCTTTGTCCAGCTTCATCCCTAATACCAGTTCTAGCGATACCTGGGGAGCTAAATTTCTACGACCACCTTCTGAGTACGACCAACATCTTATAGGCTGCATTCTGTTAACTTTAGACACCCTGAAGGCTGAAAAGGTTATGCCTACTCACGGAAATATTTCTGATTGCATTCGATATGGAGATGTGAGATATCAGACAATGGATGTCAGGAAGGCTTTAGATTGTGCAATAGAGCACGGAATGGTAGTAAAACAAAGCATAGGTTCATTGAATTTTTATGTTAACAAAAATGGGAAACTCTGGAAGTGTGTGAACCCTATAGGTGGTTATCCTAATGATTTCTCAGACGCAACATGGGCTAGAATACAGCAATTCCTTTCTTCACCAACTGGAAAATCGTCAATTTTGGCATCCCGTTGCAGATATGAAGCATCGCTTATTCTTAGGAGATCATGCATGGAAAAGGAGGTTTTAGGTGATGTACTTAAGATTCTGGAGATGATAATCTCGGTCAAGAAGTGGATTATACATAACCATTCCGGGGAGTGGCAGCCGATTACTATTACACTTGAGCAGAGTTGA 1662 0.4621 MQGTAPMTAEATTSKGTVLARSLKEAEMQYSSAKVSVWWDIENCPVSRGCDAHSIAKNISSALVRMNYCGPVSISAYGDTNRIPSSVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPLKASASLTAAARSVWLWTSLSAGGPPLSSGSSSNIASNTQSFSSERVQNRVSEPSQPRFKEKYTNCDASQFPESKTKNNHCSNPELPQAKLFPRAPHEFFCNKPNIATISSALSLPSHQDHSKSSGSNSSGGIPHDSQNSFLRQNNLHDHQESRQDYRISTSQSPNVVSLTTSTEHNPHASQASCYENVDKGSSRNCEQSKTSLSSFIPNTSSSDTWGAKFLRPPSEYDQHLIGCILLTLDTLKAEKVMPTHGNISDCIRYGDVRYQTMDVRKALDCAIEHGMVVKQSIGSLNFYVNKNGKLWKCVNPIGGYPNDFSDATWARIQQFLSSPTGKSSILASRCRYEASLILRRSCMEKEVLGDVLKILEMIISVKKWIIHNHSGEWQPITITLEQS* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0776 553 Pfam NYN domain 34 169 IPR021139 GO:0004540
Ahy16g0776 553 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 284 543 - -
Ahy16g0776 553 MobiDBLite consensus disorder prediction 315 341 - -
Ahy16g0776 553 MobiDBLite consensus disorder prediction 273 304 - -
Ahy16g0776 553 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 25 212 - -
Ahy16g0776 553 CDD PIN_limkain_b1_N_like 34 158 - -
Ahy16g0776 553 PANTHER LIMKAIN B LKAP 284 543 IPR024768 GO:0005777|GO:0010468|GO:1903231
Ahy16g0776 553 MobiDBLite consensus disorder prediction 273 341 - -
Ahy16g0776 553 Gene3D - 26 177 - -
Ahy16g0776 553 PANTHER LIMKAIN B LKAP 25 212 IPR024768 GO:0005777|GO:0010468|GO:1903231
Ahy16g0776 553 MobiDBLite consensus disorder prediction 183 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0776 Ahy-Chr16 14011761 14014615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0776 26 215 C2H2 Transcription Factor Family AT5G61190 70.918 2.42e-84 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0776 - - aip:107646579 1071.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0776 16 14011761 14014615 Ahy16g0776 16 14011761 14014615 ECH
Ahy16g0776 16 14011761 14014615 Ahy6g0560 6 6826123 6828869 hybridization