Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0731 ATGGAGAAGAAGGAGATAATGATGAGTGTGAAGATGGAAGATGCATCATCGCTATTCAGTTCTTGTTACAGCAACAGCAATAACATTCCATTATGGAGCGTGTTTGATTTGTGTCAAGAAACAGAGGAGAAGGGTTCTTTAGGGTTTATGGATCTACTTGGTGTGCATCAAGACTACTACAACGGTGGTGGTGGTGGTGGTGCTCCTCTGCTTGCTGATAATAATTCTCCATCTCAGGTAGCAGGGAAGGATTCAACAGAAGCTACGACTGTGAAAGAGTGTCCTTCAAATTCAGAGACTCAACAGCAACCTACTCCTACTACTCCAAAGTCAGCTTCACCTCTTTCATCATCTGTGTCCACCACTACTACTGTGGACCAAGCTGCACCGTCATCTCAACACGCCGACAAACTGTTGAAGGCGAAGAAGACAAATGGGAAGAAAAGAGAGAGGGAAGCTCGATACGCGTTCATGACAAAAAGCGAGGTGGATCATCTCGAAGACGGTTACAGATGGAGAAAGTACGGCCAAAAAGCTGTCAAAAACAGCCCCTTTCCAAGGAGCTATTATCGTTGCACCAGTGGATCATGTAATGTGAAGAAGCGTGTGGAAAGGTCTTTCACTGATCCAACAATTGTGGTCACAACATATGAAGGTCAACACACACATCCAAGTCCACTTCTAATGCCTCGCTCTTCATCATCATCATCAATGCCTCAAACCTACTTCTCCCACCAACACTATCTACACCCACATCATCAACAACTCTTATTTAATACATTCCCTTCTCTTGATTTTCCTCCTCCTCCTCCTCCTTCTTCTTCATCTCAGGACACCACCAATAACAATGCATTATTTCCTCTAAGCGACCATGGCCTTCTTCAAGATGTTCTTCCTTCACATATGTTCAAGCAGGAGTAG 921 0.443 MEKKEIMMSVKMEDASSLFSSCYSNSNNIPLWSVFDLCQETEEKGSLGFMDLLGVHQDYYNGGGGGGAPLLADNNSPSQVAGKDSTEATTVKECPSNSETQQQPTPTTPKSASPLSSSVSTTTTVDQAAPSSQHADKLLKAKKTNGKKREREARYAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSGSCNVKKRVERSFTDPTIVVTTYEGQHTHPSPLLMPRSSSSSSMPQTYFSHQHYLHPHHQQLLFNTFPSLDFPPPPPPSSSSQDTTNNNALFPLSDHGLLQDVLPSHMFKQE* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0731 306 PANTHER WRKY TRANSCRIPTION FACTOR 1 266 - -
Ahy16g0731 306 ProSiteProfiles WRKY domain profile. 161 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy16g0731 306 MobiDBLite consensus disorder prediction 136 152 - -
Ahy16g0731 306 SUPERFAMILY WRKY DNA-binding domain 158 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy16g0731 306 MobiDBLite consensus disorder prediction 72 131 - -
Ahy16g0731 306 Pfam WRKY DNA -binding domain 167 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy16g0731 306 SMART WRKY_cls 166 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy16g0731 306 MobiDBLite consensus disorder prediction 70 152 - -
Ahy16g0731 306 MobiDBLite consensus disorder prediction 260 287 - -
Ahy16g0731 306 Gene3D WRKY domain 151 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy16g0731 306 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 266 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0731 Ahy-Chr16 13336532 13338618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0731 134 306 WRKY Transcription Factor Family AT2G47260 52.792 7.76e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy16g0731 WRKY 2.70E-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0731 - - aip:107646061 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0731 16 13336532 13338618 Ahy16g0731 16 13336532 13338618 ECH
Ahy16g0731 16 13336532 13338618 Ahy6g0604 6 7454642 7456641 hybridization
Ahy16g0731 16 13336532 13338618 Ahy19g1205 19 22836286 22838798 PCT
Ahy16g0731 16 13336532 13338618 Ahy9g0943 9 18007304 18010586 PCT
Ahy19g1205 19 22836286 22838798 Ahy16g0731 16 13336532 13338618 PCT
Ahy9g0943 9 18007304 18010586 Ahy16g0731 16 13336532 13338618 PCT