LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy16g0703	ATGACATATCATGAAGGCACTGCTCACTCATATGTAAAGGGCCGAGACATAGTGTTAAACAATGAAACTATCAGTGATGCATTGAAGTATACTGATGTTGGGCCTTGTGCTTACACTTCAGTTAAACATTCCTATCTAAAAGGGGGTGGTGCAGTGAAACAGCAAAAAGGACCCACTAGATCTGAAAGGGTAGTCTTAGATGATGAAGATGATGACTTTGTCCCTGAGGAATCTCCTACTCCTTCCACCGACGGTACTTCCATCTCTACAGGGAAGAAATCCGCTCTGCTGAATGTGGTCAAGGATGTTGTTCAGGAGTTTTCAGAAATTGAGGCATTGACAACACTCATACAACCCATGAATTATTCCTCCAAGAATTTAGCAAGATTTATAAATTCAGCTCTCCATGCTACCAACATCTCATTTTCTGACATTAAAACCAAGGTTGCTCCATTATTATTTGAATCATTTGAGACAGTTCCTCAATTAGCCGAAATCTCATACATAGGAATGGAAGGTTACTTTTTTTCATTCTACAATGGTGATCATGGTCAACCTCTCGCAATATACTCAAATCGTTCAACATCTTCTTCCATTATTTCTAAGCATTATTATGTTCAGCCGGTGAATCCTGACAATGGAAAATTATATGGGAATGCAACAATATTTGATTCCTATGTTAATACAACTTGGGTTGGGAAAGCACTAAATGGTTCGAATGATGGATTTGTCACATTGGGAAAAAAGTTTAGCAATGATCAAGAATTCTTGTTCATTAGTTCATCAAGAATCACAAAAACAGGTTCAGTGATCTCTCTTGGAGTTCAAGCAACAAAAATAACTGGTTTTTTCTCTAGTGTTATCAGTCATCACCAACAAGGTGCCATGTTGTATCTAGCTACAAAAGATGGACAAGTGCTTCAAGAAGGGATCAAGAATACTCATATGGTTGTTGCTAAGAACAACACGGTTTCGTTTCAATATGTGAATAATCACACTAGTTATTATCAGGGTTCAGTTACATGCAAAAATGATGGTGAAGTTGTTGCTTCTACTTTGAAGATTCAGGGCGTTGAGTATTTAATGCACTGCTCCTCAATTCAGATAATGGGGATTAAATTGGTGTATGTTGTGGGAGTGCCAAAAAATGGAGCAATGATCAATTTCATAAAGGAATTTAAGAGATATGGGTTGATGGTACTGAGTGCCATGGTGATTATGTCCTTAATTGGCACAATTAGCATTGTAATTATGAAAAAGGCAGTAAAGAAGCAAAAAGAAGCAACGGAGGAAGCTGAGAGAAAGAGTAAGAATAAGAGCATTGCTTTTGCGACAGCATGCCATGATGTTCGTGCTTCCCTCGCAACCCTGACTGGTTTGATAGAGTTGTCATCTTCACAACTTGTCCCTTCTTCATCAGAACTAAACTCCAATCTCAAACAAATGGACTCTTGTACCAAGGATTTACTAGGAATGCTGAATTCCATATTGGATGCAAGCAAGATTGAAGCAGGGGAAATGCAACTTGAGGAAGAAGAATTTGATGTGTTCCAATTCTTAGAGGAGGTAGTTGATTCTTACCATAACGTGGCTATGAAGAAAGGAGTAGATATTGTATTGGAACCCTTCAATGACTCAGTTCACAGATATTCACACACAAAAGGTGACAGAGTTAAACTCAAGAGAGTCTTATGCAACTTATTAGACAATGCTGTTAAATTCACTGATGAAGGACACATAGCAGTTAGGGTAAGGGCACAGAAACCTGTATTGCAAAACTCAATGTCAATGATGAGGGTTACTAACCAAAATAGACCTTGGTCATGCTTATTCATCAAAAGAAAAAATAATGAACGACGGAATGATGATGACATAGAAGCTTCTAATTCAACCCAACCAGATCCTAGTAATACCATGGATTTCATATTTGAAGTTGAAGATACTGGCAAAGGAATTCCCAAAGACAAGCATGAGTCTGTGTTTGAGAATTATGTCCAAGTCAAAGAAACTGCTATTGACCATGGTGGAACTGGTTTGGGACTTGGCAGTGTGAGATCTTTGGTTCGATTGATGCATGGAGATATTAGAATTGTGGAGAAGGATAATGGTGGAAAAGGAACATGTTTCAGGTTCAATGTGCACCTCACTGTATGTGAGAAAAGAACAGATGATATCACAAGAGAAAGTGAATCTAAACCAGTTGACAGAACTCAATCACACAGGTCAACCATTCATGCTACTAGTTCTGGTTCAAGCATGTGTTCCTTGAGTCCCAAGATACCTATCTGCGGCCCTAGCACTTCTTGGCACGAGGGATCTCGAGTTGTTCTCTTGATTCAAGGAGAAGAGCGCCGAAGAGCAACACAAAGGTTCATAGAGAGAAAAGGGATCAAAGTTAAGGTTGTTAAGCAGTGGACTAATCTGTCTCATACCCTCAATAAGATAAAAAAGAAGGGTCTGAATAGCTTAAGTTCAGGTTCTAGTTCTAGTTCTGCAACACATGGTTCTACTAATGCCCCTTTGAGTGCATCCATGGATGAAATCGAATCTACCCAAGGATTCGTCCTGATTGTGATTGATGCAAAAGCAGGACCATTTCAAGAACTATGCAGGGTGGTATCTGAATTCAAGAGAGGCATTTGTATTTCTTGTAGAGTTGTTTGGTTAGAGAATCCAATTTCTCCTAATCTTGATTTCAATAGCCTAAATGAGGATGATTATGACCCCAATGACATTGTTCTTCATAAACCATTACATGGTACCTCTTTGTTCCAAGTTTTAAGTCTTCTTCCAGAGTATGGTGATGGATCAATGAGAGGAAGTGGGTCAATACTAGCTTCCTCAAGTACAATTCAAAGAGCTGAACTAGAAAAGTGCGGCACTTCAAGGTCAAGGAGTGGGAAGGAACCACAACAATCCATTGGAGATCAATCTCATGATCAAGGAGGAACAAAAGAGTGTGAAGTTCCAAGAAGCAGTGACAAGCCCTTGAGTGGTAAGAGAATTATGGTGGTTGAAGACGATAACACGATCCGCAAGATAGCTTCTGCTTCTTTGGAACAGCTTGGTGCTTCTGTTGAGAAATGTGAGAATGGTGAACAAGCTGTGGAGCTAGTTAAAGAGGGTCTAGCTAGAGATTTTCCAAATCTTCCATATGATTACATCTTTATGGACTGCCAGATGCCAGTGATGAATGGATACGAGGCAACAAGGCTAATAAGAGAGATAGAGAAGGAGTATAACATTCACATTCCTATATTTGCATTAACTGCTAATACTCAGGAAGAGACAAACCCATTAGAAGCTGGAATGGACCATCACTTAGTCAAACCCATTGACAAAAAGGGTTTGCTTGAAGCCATCACAAAAGTACACGATAGAGTTGCCATTAGAGAGTGA	3399	0.3934	MTYHEGTAHSYVKGRDIVLNNETISDALKYTDVGPCAYTSVKHSYLKGGGAVKQQKGPTRSERVVLDDEDDDFVPEESPTPSTDGTSISTGKKSALLNVVKDVVQEFSEIEALTTLIQPMNYSSKNLARFINSALHATNISFSDIKTKVAPLLFESFETVPQLAEISYIGMEGYFFSFYNGDHGQPLAIYSNRSTSSSIISKHYYVQPVNPDNGKLYGNATIFDSYVNTTWVGKALNGSNDGFVTLGKKFSNDQEFLFISSSRITKTGSVISLGVQATKITGFFSSVISHHQQGAMLYLATKDGQVLQEGIKNTHMVVAKNNTVSFQYVNNHTSYYQGSVTCKNDGEVVASTLKIQGVEYLMHCSSIQIMGIKLVYVVGVPKNGAMINFIKEFKRYGLMVLSAMVIMSLIGTISIVIMKKAVKKQKEATEEAERKSKNKSIAFATACHDVRASLATLTGLIELSSSQLVPSSSELNSNLKQMDSCTKDLLGMLNSILDASKIEAGEMQLEEEEFDVFQFLEEVVDSYHNVAMKKGVDIVLEPFNDSVHRYSHTKGDRVKLKRVLCNLLDNAVKFTDEGHIAVRVRAQKPVLQNSMSMMRVTNQNRPWSCLFIKRKNNERRNDDDIEASNSTQPDPSNTMDFIFEVEDTGKGIPKDKHESVFENYVQVKETAIDHGGTGLGLGSVRSLVRLMHGDIRIVEKDNGGKGTCFRFNVHLTVCEKRTDDITRESESKPVDRTQSHRSTIHATSSGSSMCSLSPKIPICGPSTSWHEGSRVVLLIQGEERRRATQRFIERKGIKVKVVKQWTNLSHTLNKIKKKGLNSLSSGSSSSSATHGSTNAPLSASMDEIESTQGFVLIVIDAKAGPFQELCRVVSEFKRGICISCRVVWLENPISPNLDFNSLNEDDYDPNDIVLHKPLHGTSLFQVLSLLPEYGDGSMRGSGSILASSSTIQRAELEKCGTSRSRSGKEPQQSIGDQSHDQGGTKECEVPRSSDKPLSGKRIMVVEDDNTIRKIASASLEQLGASVEKCENGEQAVELVKEGLARDFPNLPYDYIFMDCQMPVMNGYEATRLIREIEKEYNIHIPIFALTANTQEETNPLEAGMDHHLVKPIDKKGLLEAITKVHDRVAIRE*	1133

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy16g0703	1132	SUPERFAMILY	CheY-like	996	1127	IPR011006	-
	Ahy16g0703	1132	SMART	REC_2	1000	1121	IPR001789	GO:0000160
	Ahy16g0703	1132	SMART	HKATPase_4	555	717	IPR003594	-
	Ahy16g0703	1132	MobiDBLite	consensus disorder prediction	49	89	-	-
	Ahy16g0703	1132	Coils	Coil	415	439	-	-
	Ahy16g0703	1132	PRINTS	Bacterial sensor protein C-terminal signature	701	714	IPR004358	GO:0016310\|GO:0016772
	Ahy16g0703	1132	PRINTS	Bacterial sensor protein C-terminal signature	641	655	IPR004358	GO:0016310\|GO:0016772
	Ahy16g0703	1132	PRINTS	Bacterial sensor protein C-terminal signature	659	669	IPR004358	GO:0016310\|GO:0016772
	Ahy16g0703	1132	PRINTS	Bacterial sensor protein C-terminal signature	675	693	IPR004358	GO:0016310\|GO:0016772
	Ahy16g0703	1132	Pfam	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	555	716	IPR003594	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy16g0703	Ahy-Chr16	12905732	12919973	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy16g0703	121	1114	Histidine Kinase Gene Family	AT2G47430	37.465	0.0	610

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	Others	Ahy16g0703		HATPase_c	3.00E-26	CL0025

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy16g0703	-		-	aip:107646610	2177.52

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy16g0703	16	12905732	12919973	Ahy16g0703	16	12905732	12919973	ECH

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