Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0682 ATGAATGATGAAAGAATGGAGAGTGCAGAGGAAGAGAAGGAGAACAAGAAGGAAGGAGAGGCTGAAGGAAAGCATAAGGCCGGGGCGGATTGCGAAAGTAGTTACAAAGAGAGGGAGCAACATAGAGTGACAACAAATCCATCTAGGCCAAAGGAGGCACCGTTGATTGAACTTCTTGCTGAATGCTTTCGGATTAAGCATTATCCAGATAATGTTCATAAGCAAGATACAATCTCAAAAGAACCAGCTCTCAATGTTCAGAGAAAATTTTTTGTTCCAAAGAAAGTGCCAATTGAAAAAACTGAATCTGAGAAGGAGAGGGATATGTTGTGGGAAGAAATGGATGCTTTGCTCAGACTAGGTGAAGTTGACTCCTTGGTTGGCTGTGTTGAGATTGTCGAAACGCAACAGAACACAGAGGCTCCAGCAACCCATTGTAAGCACAAGTTTGTCCATGATGAAGAGACTGGAATATATTGCATACTCTGCCATTGGATGGTCATAGACATAAAAGGCATGCCGGTACCCTTTGTGAGTGAGTATCCAAGAGAAGGATCAAGAAAGAAGCTGCTATCTGATGGGCCTAATGGCTTATGCTTTGATGATGCTCCATTCGGTGTCCGAGAAGGTGGTTACTGTAACAAGGAAGGCACAGTTTGGGACCTGATTCCAGCAGATACTAAGCAAAACCTGTATGCTCATCAGCTTGAAAGTTTTGAATTCCTTTGGAAAAACTTGGCAGGAACCATGGAGCTTCCTAAATTGAAGAGTTGTGACTCGAACAGCACGGGTGGATGCATCATTTCTCATGCTCCAGGGACTGGAAAGACGCGGCTGACCATCGTGTTCCTTCAGACATGCTTGGAAGTGTTTCCAGATTGCCATCCCATGATTATTGCTCCTGATAGCTTACTGCTAACTTGGGAAGATGAGTTCAGAAAGTGGGACAATGAGATTCCGTTCCATAATTTGAGCAATCAAGACACTTCAGGAAAAGAGCACCTAGCTGCATGCAGCAAAGTTGGAGGGTCTGCTCCAAGCCAGGAAGATATCCAGATGGTGAAGCTGTATTCTTGGTTCAAACAACCAAGTATTCTTGGAATCAGCTACAGTTTATTTCAGAGGCTTACCGGCTTGAAGCGTGATAGAAGCTTGAAGGAGAATGCTGCCACAGGGGTCATGGGAAAAATCCTGCCTGAAATTCCTGGATTGTTGGTATTGGATGAAGGACACACGCCACGAAATCAGAGTAGTCAGATTTGGAAGGTTCTTTCTGAGATTCAAACTCACAAGAGAATCATCCTTTCCGGGACTCCTTTCCAGAACAATTTTCTGGAGCTTTACAATACAATCTGCGTGGTCAGACCGTGCTTTTCGGATACCATACCTCCTGAGCTTAAAAAGTTCTGCCAAAGAAGATTGATGCAAGAGAAGAAAGAATCTAAAGGTTTCAGTTGGGAACCAGTTTCTTCATTCAGAACTGAGAATCTAAATGATGAGAACATCAAGCAGTTGAAGCAGCTGATGGATCCATTTGTGCATGTTCACAAAGGCAGTATTCTTCAGAAGAATGTTCCTGGTTTGAAAGACTGCGTGGTGAAGGGGGATAACATGGTGCGCCATGGGAAACTGAGAGACTTGTTTGGTGACTGTGTGATGCAGCCAAATGACTGTGATTTGATTGATAATTTGGATCCTAAAATTTCCTGA 1710 0.4363 MNDERMESAEEEKENKKEGEAEGKHKAGADCESSYKEREQHRVTTNPSRPKEAPLIELLAECFRIKHYPDNVHKQDTISKEPALNVQRKFFVPKKVPIEKTESEKERDMLWEEMDALLRLGEVDSLVGCVEIVETQQNTEAPATHCKHKFVHDEETGIYCILCHWMVIDIKGMPVPFVSEYPREGSRKKLLSDGPNGLCFDDAPFGVREGGYCNKEGTVWDLIPADTKQNLYAHQLESFEFLWKNLAGTMELPKLKSCDSNSTGGCIISHAPGTGKTRLTIVFLQTCLEVFPDCHPMIIAPDSLLLTWEDEFRKWDNEIPFHNLSNQDTSGKEHLAACSKVGGSAPSQEDIQMVKLYSWFKQPSILGISYSLFQRLTGLKRDRSLKENAATGVMGKILPEIPGLLVLDEGHTPRNQSSQIWKVLSEIQTHKRIILSGTPFQNNFLELYNTICVVRPCFSDTIPPELKKFCQRRLMQEKKESKGFSWEPVSSFRTENLNDENIKQLKQLMDPFVHVHKGSILQKNVPGLKDCVVKGDNMVRHGKLRDLFGDCVMQPNDCDLIDNLDPKIS* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0682 569 MobiDBLite consensus disorder prediction 1 51 - -
Ahy16g0682 569 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 6 533 IPR044567 GO:0080188
Ahy16g0682 569 MobiDBLite consensus disorder prediction 1 46 - -
Ahy16g0682 569 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 4 6 533 - -
Ahy16g0682 569 SMART ultradead3 227 469 IPR014001 -
Ahy16g0682 569 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 257 457 IPR014001 -
Ahy16g0682 569 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 217 512 IPR027417 -
Ahy16g0682 569 Pfam SNF2-related domain 248 527 IPR000330 GO:0005524|GO:0140658
Ahy16g0682 569 Gene3D - 213 511 IPR038718 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0682 Ahy-Chr16 12548563 12550934 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Ahy16g0682 SNF2_N 4.20E-21 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0682 K10875 - aip:107627890 733.021