Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0675 ATGGAAGTTCAAGTTGGAGCAGTATCAAACAGAAGCTGTAACGATTGCCACACAACCACCACACCTCTATGGAGGGCTGGTCCAGATGGCCCTAGGTCTCTTTGCAATGCATGTGGGCTAAGGTACAGGAAGAGGAGGAAAGCCCTGGATAAAGGGGGAGCAAAGAAAAGCAGGAAGAGGAATAATAGAGCAACAAGTGAGCATGATGATGAAGTGGATTTTGGTTGCAATATGGAGCCTTATACATTACATGGAAGAAGTCAATTCAAGTTAAAAGAAGAAGAAGAGGCTGCTATATTGTTGATGGCCCTTTCTTGTGCTTATTAG 327 0.4404 MEVQVGAVSNRSCNDCHTTTTPLWRAGPDGPRSLCNACGLRYRKRRKALDKGGAKKSRKRNNRATSEHDDEVDFGCNMEPYTLHGRSQFKLKEEEEAAILLMALSCAY* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0675 108 MobiDBLite consensus disorder prediction 47 71 - -
Ahy16g0675 108 Gene3D - 9 71 IPR013088 GO:0006355|GO:0008270
Ahy16g0675 108 CDD ZnF_GATA 12 60 IPR000679 GO:0006355|GO:0043565
Ahy16g0675 108 Pfam GATA zinc finger 13 47 IPR000679 GO:0006355|GO:0043565
Ahy16g0675 108 SMART GATA_3 7 66 IPR000679 GO:0006355|GO:0043565
Ahy16g0675 108 ProSitePatterns GATA-type zinc finger domain. 13 38 IPR000679 GO:0006355|GO:0043565
Ahy16g0675 108 ProSiteProfiles GATA-type zinc finger domain profile. 7 43 IPR000679 GO:0006355|GO:0043565
Ahy16g0675 108 PANTHER OS01G0976800 PROTEIN 9 107 - -
Ahy16g0675 108 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 10 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0675 Ahy-Chr16 12433222 12434184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0675 7 107 C2C2-Gata Transcription Factor Family AT3G06740 42.727 3.87e-22 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Ahy16g0675 GATA 3.90E-18 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0675 - - adu:107492427 217.238