Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0633 ATGTTGGTCAACACTGCCCCTCTTAGCATGCAGGCCACGTTTCGCACCATGGTTTCGTTGCCCAGTCCAATTGCAGCCTGTTGCAGGCTTCGATGGTGCAACCAGCTCTCCCCACCCGTGGAGCATCGGGCCTTCACCCCCGAAGAGGACGATACCATAATCAGAGCTCACACTCGGTTCGGCAACAAGTGGGCCACCATAGCCCGACTCCTTTCCGACAAAACTGACAATGCCATTAAGAACCACCGGAACTCCACCCTCAAACGCAAGTGCGCCTCCATAGGCCCCATCGACGATCCTCACTTCGCGCAGCCACTCAAACGCTCCGTCAGCACCAGCGCCGCCGTACCCGTGTCAACGGTGGTGGTGAGGTACTCGTTGCCGACGGTGATGGCGACGATGGAGGTGGCGGGCCGTGGCCCAACTCATCCATGCCCTTCACCACTTTGA 450 0.5911 MLVNTAPLSMQATFRTMVSLPSPIAACCRLRWCNQLSPPVEHRAFTPEEDDTIIRAHTRFGNKWATIARLLSDKTDNAIKNHRNSTLKRKCASIGPIDDPHFAQPLKRSVSTSAAVPVSTVVVRYSLPTVMATMEVAGRGPTHPCPSPL* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0633 149 Pfam Myb-like DNA-binding domain 44 82 IPR001005 -
Ahy16g0633 149 CDD SANT 44 82 IPR001005 -
Ahy16g0633 149 Gene3D - 43 104 - -
Ahy16g0633 149 SUPERFAMILY Homeodomain-like 26 91 IPR009057 -
Ahy16g0633 149 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 91 IPR017930 -
Ahy16g0633 149 PANTHER MYB PROTEIN-RELATED 26 115 - -
Ahy16g0633 149 SMART sant 41 89 IPR001005 -
Ahy16g0633 149 ProSiteProfiles Myb-like domain profile. 37 87 IPR001005 -
Ahy16g0633 149 PANTHER TRANSCRIPTION FACTOR MYB73 26 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0633 Ahy-Chr16 11652793 11653766 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0633 19 116 MYB Transcription Factor Family AT4G37260 59.259 1.32e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy16g0633 Myb_DNA-binding 1.20E-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0633 K09422 - aip:107641435 221.861