Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0624 ATGGTCATAATATCACGCCTTATGTTACCCCATGCATTATTATTATTGTTCCTTTCATCATTCCTAGCAAGCAGTGGCCAAATGGTGGTTGCAAAAGGGAACAAAAATGGTTATGTTAGAGAAGCTTGCAGTGTAACAAGGTACCAAGACTTGTGTGTTCATTCACTAGCACAATTCTCCAACACTGCGGGAACAAGTCCTAGCAAATGGGCACGTGCTGGGGTATCAGTGACAATAGGCGAGGTAAAGAAAGTTCGAGCATACTTGGCACAGTTGAAAAGAAACGGAGGATTCATAGGAAGAAACAGAGCTGCACTTTCAGATTGTGCTGAGGTTTTTGATGATGCACTTGATGAGCTTCATAGATCACTTGATGTGCTAAGAAAGCTTAGCAAAACCACGTTTAGCACACAAATGGGGGATCTTAATACGTGGATTAGCGCCGCGCTAACCGATGAAGACACTTGCCTTGATGGATTTTCATTTCAAGTCCAAGATGATAATAATAATAATAATCATAACAATAATAAGAAGAAGCAGATCAAGTTGCTGCAGAGGAGGGTCCAGAATGTTTCTTACATAACCAGCAATGCTCTAGCTCTTGTTAACAAGCTTGCTACCACAGGTATTGGAAGCTTTGAACAAGACAAGTCCTGA 657 0.4125 MVIISRLMLPHALLLLFLSSFLASSGQMVVAKGNKNGYVREACSVTRYQDLCVHSLAQFSNTAGTSPSKWARAGVSVTIGEVKKVRAYLAQLKRNGGFIGRNRAALSDCAEVFDDALDELHRSLDVLRKLSKTTFSTQMGDLNTWISAALTDEDTCLDGFSFQVQDDNNNNNHNNNKKKQIKLLQRRVQNVSYITSNALALVNKLATTGIGSFEQDKS* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0624 218 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 22 200 - -
Ahy16g0624 218 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 205 IPR035513 -
Ahy16g0624 218 CDD PMEI-like_3 42 207 - -
Ahy16g0624 218 Pfam Plant invertase/pectin methylesterase inhibitor 39 201 IPR006501 GO:0004857
Ahy16g0624 218 SMART PMEI_2 34 201 IPR006501 GO:0004857
Ahy16g0624 218 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 207 IPR035513 -
Ahy16g0624 218 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 205 IPR006501 GO:0004857
Ahy16g0624 218 PANTHER PECTINESTERASE INHIBITOR-LIKE 22 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0624 Ahy-Chr16 11560209 11561460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0624 39 215 Carbohydrate Esterase AT3G14310 35.196 7.05e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0624 - - adu:107492431 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0624 16 11560209 11561460 Ahy16g0624 16 11560209 11561460 ECH
Ahy16g0624 16 11560209 11561460 Ahy6g0681 6 8380594 8381783 hybridization