Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0592 ATGTCAAACAATATGTCAGGTAATGAAGATGGAAGCTTCTCTTCTGGAAACACTGGAGAAGAAGAAGTTCATCAAGAAAACAAGCAGCAGCAACAACAAACCAATAAAAAGAAAAGAAACCTACCAGGAACCCCAGATCCAAGTGCAGAAGTAGTAGCTCTGTCACCAACAACATTAATGGCAACAAACAGATTCGTGTGTGAGATATGCAACAAAGGTTTCCAGAGGGACCAAAACCTTCAACTACACAGGAGAGGACACAATCTACCATGGAAGCTAAGGCAAAGAACAACCACAGAGGTCAAGAAGCGTGTCTACGTCTGCCCTGAGCCCACGTGCGTTCACCACAACCCATCACGTGCTCTTGGCGACCTCACCGGCATCAAGAAACACTTCAGCCGCAAACACGGCGAAAAGAAATGGAAGTGTGACAAGTGTTCCAAACGCTACGCTGTTCAATCTGATTGGAAGGCCCACCTCAAAACTTGCGGCACTCGCGAGTATAAGTGTGATTGCGGCACCATCTTTTCCAGAAGAGACAGTTTCATTACTCATCGTGCTTTCTGTGATGCTTTGACCGAAGAAAATAACAAACTTTCTTCCACCCACCATCAGTGTTTGTTAACAACTGGCATGCCCCCTAGTCAGATTCCATTAACCACTTCTTCTTCTTCATCAGATCAATTATTCATCACTGATCCACCACTTATCATTCCAACAACAACTCCTTTCAATAACTCCATCTTCTCATCAACAACTACTTCTTCTTGTTCTTCTTCAACGCTTCAGCTGAGTTCTACTGGCTTCAACAATGTTATTCTTTCTTCTAATCCATCTTCATCATCGCCTCATATGTCTGCAACTGCTTTGTTGCAGAAAGCAGCTCAAATGGGTGCAACTGCAAGTAACAACAGCATGAATTATTCACCCATGATGCAGAAAAGCTTCTCCATGGGAACAACCACCATGGCTGGAGTTAGTGCTGGCCATGATGCTGCATTTACAAACCAATTGTTTCAGAAAGAAATCGTCTCACAACTGTTTGATGCAAACACTACTACTAATCGCAGGTTATGGGTGTATATTTGA 1089 0.4334 MSNNMSGNEDGSFSSGNTGEEEVHQENKQQQQQTNKKKRNLPGTPDPSAEVVALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVKKRVYVCPEPTCVHHNPSRALGDLTGIKKHFSRKHGEKKWKCDKCSKRYAVQSDWKAHLKTCGTREYKCDCGTIFSRRDSFITHRAFCDALTEENNKLSSTHHQCLLTTGMPPSQIPLTTSSSSSDQLFITDPPLIIPTTTPFNNSIFSSTTTSSCSSSTLQLSSTGFNNVILSSNPSSSSPHMSATALLQKAAQMGATASNNSMNYSPMMQKSFSMGTTTMAGVSAGHDAAFTNQLFQKEIVSQLFDANTTTNRRLWVYI* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0592 362 Pfam Zinc-finger of C2H2 type 65 87 - -
Ahy16g0592 362 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 5 324 - -
Ahy16g0592 362 MobiDBLite consensus disorder prediction 1 20 - -
Ahy16g0592 362 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 5 324 - -
Ahy16g0592 362 ProSitePatterns Zinc finger C2H2 type domain signature. 67 87 IPR013087 -
Ahy16g0592 362 SMART c2h2final6 106 136 IPR013087 -
Ahy16g0592 362 SMART c2h2final6 65 87 IPR013087 -
Ahy16g0592 362 SMART c2h2final6 141 161 IPR013087 -
Ahy16g0592 362 Gene3D Classic Zinc Finger 42 110 - -
Ahy16g0592 362 Gene3D Classic Zinc Finger 119 200 - -
Ahy16g0592 362 ProSiteProfiles Zinc finger C2H2 type domain profile. 65 87 IPR013087 -
Ahy16g0592 362 SUPERFAMILY beta-beta-alpha zinc fingers 64 161 IPR036236 -
Ahy16g0592 362 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0592 Ahy-Chr16 11171067 11172988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0592 34 306 IDZ Gene Family AT3G50700 57.276 5.07e-118 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy16g0592 zf-met 0.0024 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0592 - - ahf:112756635 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0592 16 11171067 11172988 Ahy16g0592 16 11171067 11172988 ECH
Ahy16g0592 16 11171067 11172988 Ahy19g1487 19 40081469 40088133 ECH