Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0568 ATGGCAGAGCTAAGTGCGGCCGCAACCTTCACACCCAGCGATGAAGAACTCATTCATTTCCTTTCCGACAAGGTGAAAGGCCAATCAATGGACGAGGACGCCGCCATCAACATCCACGAATGTGAATACTTGTACGGCCGCAACAAGAACCCTTGGGACATTTGGCGGGACTTCGCCGGCGACGTTGATGCCGGCAGGACCGCCCTTTTCTTCTTCTCTCCCACCAAAAAGCACCATTCCACAGCCTCTCGCCCCATCGGAGCCGGCGTCTGGGAAGCTGAAGCCGAAACCATTGACGGCGAAAGCATCGTTGGCAAGGGCAAGAACCGCCGTATTGGGACCAAGAAATGTTTCGTCTTTGACAAGAGTGGCACCTCCTACGATGGTGCATGGATCTTGCATGAATACACTCTTCATGGATCCTCGCTCCACACTAATACTTCAGTGGATCATAGCTATGTTATATGCAAATTGATAAAGAATGTAGAAGGTGAAGCTCATCCAGTTGAGGTGCAGTTTGGAGACAAAAGAAAAAGGCACGGTCAATCTGCCACCACCAGCGGCGTTCAAATTGATGTTAACGCTCCTCATTCATATGTGGTGCTGACCAATTGTCATATATATTTTAAGAGGAACACTAAAGAGCAAGAGGTCCAATTCATACCAAATGAACTTGGCAGGCGAATGTTGTTGGAAATGTTTGAGGGTAAGTATATGAAAGATGATGAGGATGGTTTAACTCTTTCTTTCATTGTTAAACAAGGATTACCAATCACGAACGAGAACCTCATCAGAAACCTCATGCAGCTGCAAGGGGGAACAAGAAGAGGTGGAAAAGGCATCTAA 846 0.474 MAELSAAATFTPSDEELIHFLSDKVKGQSMDEDAAINIHECEYLYGRNKNPWDIWRDFAGDVDAGRTALFFFSPTKKHHSTASRPIGAGVWEAEAETIDGESIVGKGKNRRIGTKKCFVFDKSGTSYDGAWILHEYTLHGSSLHTNTSVDHSYVICKLIKNVEGEAHPVEVQFGDKRKRHGQSATTSGVQIDVNAPHSYVVLTNCHIYFKRNTKEQEVQFIPNELGRRMLLEMFEGKYMKDDEDGLTLSFIVKQGLPITNENLIRNLMQLQGGTRRGGKGI* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0568 281 Gene3D NAC domain 13 164 IPR036093 GO:0003677|GO:0006355
Ahy16g0568 281 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 9 185 - -
Ahy16g0568 281 ProSiteProfiles NAC domain profile. 4 161 IPR003441 GO:0003677|GO:0006355
Ahy16g0568 281 SUPERFAMILY NAC domain 3 159 IPR036093 GO:0003677|GO:0006355
Ahy16g0568 281 Pfam No apical meristem (NAM) protein 9 138 IPR003441 GO:0003677|GO:0006355
Ahy16g0568 281 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 9 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0568 Ahy-Chr16 10813463 10815057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0568 1 170 NAC Transcription Factor Family AT5G24590 30.556 8.67e-14 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy16g0568 NAM 2.00E-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0568 - - ahf:112756623 580.096