Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0555 ATGTTTAAGGAGAGTCGCAAGCTTCTGCTAGGGCTATGTTCACTCTGCAGGAGCGACTGTTGTTCATCAATTCTGCCATCTTGGCTCTTTCTCTTTTCTTGGTGGTGGTTATGTGGTTTCGCAAGATGTTCCAAAGTACACAATGGTAGCCGGAGAAAGAGCGGAGCTTCGGGGTCTAAATTTAGTGGGCCTGACTCGACGTGGATTCAGCACTGCAGAGGTTATACTAACAAAAATTTTAAAATTACTCGTCTTCGATGTCATCGGTGCGAGCTCGTGGAGGGAGAGAGGGAATCAGAAGAATTGCAATCAGATGAAAATAAAGCTTCTACAGAGAGAAAAAAAAATAAAAGAAGACTCAAAATACCTTCCCAGATTATGGCCTTGGAGAAATTTTATAACGAGCACAAATATCCCACGGAGGAAATGAAACAAGATCTTGCTGAGGAGTTAGGGTTGACTGAGAAGCAAATTTCTGGATGGTTTTGCCACATAAGGTTAAAAGATAAACAGTTGTTGAAAGATGAAGCGATTGGTAATGGATGA 546 0.4176 MFKESRKLLLGLCSLCRSDCCSSILPSWLFLFSWWWLCGFARCSKVHNGSRRKSGASGSKFSGPDSTWIQHCRGYTNKNFKITRLRCHRCELVEGERESEELQSDENKASTERKKNKRRLKIPSQIMALEKFYNEHKYPTEEMKQDLAEELGLTEKQISGWFCHIRLKDKQLLKDEAIGNG* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0555 181 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 98 181 - -
Ahy16g0555 181 SUPERFAMILY Homeodomain-like 108 174 IPR009057 -
Ahy16g0555 181 Pfam Homeodomain 115 171 IPR001356 GO:0003677
Ahy16g0555 181 SMART HOX_1 114 176 IPR001356 GO:0003677
Ahy16g0555 181 CDD homeodomain 115 170 IPR001356 GO:0003677
Ahy16g0555 181 Gene3D - 101 180 - -
Ahy16g0555 181 ProSiteProfiles 'Homeobox' domain profile. 112 172 IPR001356 GO:0003677
Ahy16g0555 181 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 98 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0555 Ahy-Chr16 10547676 10551430 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0555 98 179 Homeobox Transcription Factor Family AT4G03250 67.857 2.10e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Ahy16g0555 Homeodomain 8.60E-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0555 - - aip:107645585 344.739