Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0548 ATGGCTCAGCTTCTGAATCTGCCTTCTTCTTCCGCGTCACTGGTTGTGTGCCTGAGTGGTTCTGCCGTGCCTTCGGTATCTGGTTCTACCTTCTTCTTCAGCGTTTCACCGCCTCACTGGTTATCTGGTACTCGCTCTGGTCCTGCTTTCTTCTTCTGCGTTCCTCTTTTGCGTTCCTCTTCAGGAACTTCAGCTCTTCTAGTTCTGTCTTCTTCTTCTGCGATCCGTCCCTCGGTCCCTGCTCTTCAGTCTTCAGCCTTTCGCCTTCGTCTTGCAATCCTGCTGCGCTGGCCTACCTCCTTGGACTCTTGTCTCTTGCATCGAGTAGTTGATTTATCTTATTTATTTCCCTTATCTTATTTATTTCCCGAGATAAATCGCTTTCCCCAGACCAATATCTCAACTTCTCTAGAGGGACATGATACCAGTGACCCACGCTTATCTCCTAACCCTCCTTCTACCCCTCCTTCTACTAGGGAAGATGATAACAGTGACCCACCCTTATCTCCTAAAAAGAAATGTACTGTGTTACCTTTGGTATGGCTTTTAATTTGTTTTTCGTTTGGGGGTTTAGTTTACAAGTTCGGGAAGTTTAGGGATAAATCTAATAAGTGTAATTGTATAAAGAAGTTTGTGGTAATTGTGGATGCCGTCTATTTCATAGTAGTTACTCTAAGCACAATAGGTTACGGGGATATTACCCCTATTTCTGAAGCTGGTAAAGTTCTTACTATGATTTTAGCTCTTTTCTGTCCTGTGGTTTCCGCTATTCTTGAAGGCTACCTGAAATGCCTTCTTAGAAAATTAGAAAAGTGCTTAGTTAAAAAATTAGAAGGAGGCATGTTAGATTGTTTGGTAGTTAACCATAAAATAGTTTATTGTTTAAAATTTTTCTTAGCACTTCTTGCTGGCCCGTTTGTCTTTGGCATCGGAGCATTCATAGTTCATCGTTCAGAGGGAATGAGTTGGTTAGATAGTTTTTACTTTTCTGTGATTTCCATAACAACAGTTGGTTATGGGGATTACTCTTTTAGAACAACAATAGGAAAGTGTGTTACATGTATTTGGTTTTTATTTAGTTCTGTCATTTATAGTTTTGCAATTTCATTTCTGATAAGTTGTATTCTTATGCCAATTACTCCTCAAAACGAATGA 1155 0.4026 MAQLLNLPSSSASLVVCLSGSAVPSVSGSTFFFSVSPPHWLSGTRSGPAFFFCVPLLRSSSGTSALLVLSSSSAIRPSVPALQSSAFRLRLAILLRWPTSLDSCLLHRVVDLSYLFPLSYLFPEINRFPQTNISTSLEGHDTSDPRLSPNPPSTPPSTREDDNSDPPLSPKKKCTVLPLVWLLICFSFGGLVYKFGKFRDKSNKCNCIKKFVVIVDAVYFIVVTLSTIGYGDITPISEAGKVLTMILALFCPVVSAILEGYLKCLLRKLEKCLVKKLEGGMLDCLVVNHKIVYCLKFFLALLAGPFVFGIGAFIVHRSEGMSWLDSFYFSVISITTVGYGDYSFRTTIGKCVTCIWFLFSSVIYSFAISFLISCILMPITPQNE* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0548 384 SUPERFAMILY Voltage-gated potassium channels 173 263 - -
Ahy16g0548 384 PANTHER TWO-PORE POTASSIUM CHANNEL 3 158 371 - -
Ahy16g0548 384 PRINTS Two pore domain K+ channel signature 223 251 IPR003280 GO:0005267|GO:0016020|GO:0071805
Ahy16g0548 384 PRINTS Two pore domain K+ channel signature 335 344 IPR003280 GO:0005267|GO:0016020|GO:0071805
Ahy16g0548 384 MobiDBLite consensus disorder prediction 138 169 - -
Ahy16g0548 384 Gene3D - 271 379 - -
Ahy16g0548 384 Pfam Ion channel 307 373 IPR013099 -
Ahy16g0548 384 Pfam Ion channel 182 251 IPR013099 -
Ahy16g0548 384 SUPERFAMILY Voltage-gated potassium channels 272 373 - -
Ahy16g0548 384 Gene3D - 169 265 - -
Ahy16g0548 384 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 158 371 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0548 Ahy-Chr16 10291667 10294364 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0548 156 362 Ion Channels AT1G02510 34.404 1.56e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0548 K05389 - sind:105175675 118.242