Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy16g0544 | ATGACTGTAGTTGAGGCATATATTGGAAGGAACAAATTACATCCACCAGATGACTCATCAAAGTTAAATCCGGAAGTTTTATCCTTGATAAACGAGGGCATTGCCCAGAATACTACTGGAAATGTTTTTGTGCCTAAGGAAGGGGGAGAGGCAGAGATTTCAGGATCTCCTACAGAGAAGGCAATTCTTTCATGGGCAGTAAAATTGGGTATGAATTTCAGTCTTCTCAGATCAAATACGATAGTTCTCCATGTCTTCCCCTTTAATTCCGAGAAAAAAAGAGGAGGGCTCTGGAGTACATACACATTGGAAAGGAGGGCTCTTGATCACGAGGGATTTGTTGCTGAGGGGCCTAATATGAATGTGGCTTTTGTGACTAAAGAGAAGGAGCTTATAATGCCCCACTTCGATAAAATTCTTAGTGGCTGCACAGCTAAGAGGGTTTTGACGCTTGCTGAGAAGTTGTTGAGCAAGGGTAAGCTTCGTGGGATAAGGATGAAACATGTGACTGTTGAGGAAGGAAAGAGTGCCGCTGAAATGATGCTTATTGGCAGTGGCGTCCTTGTTTGCCCTGTAGTGCAGTGGGACGAGCAAGTTATTAGAGATGATATTGGTCTTTCTATGGGCATCCAAGGAACTGAAGTTGCAAAAGAAAGCTCAGATATTATAATCCTGGATGATAACTTTGCCTCAGTAGTAAAGAGATTTTTGGTCCAATCCCTTCAACTTTTTGCTTGGAGTTAA | 744 | 0.4234 | MTVVEAYIGRNKLHPPDDSSKLNPEVLSLINEGIAQNTTGNVFVPKEGGEAEISGSPTEKAILSWAVKLGMNFSLLRSNTIVLHVFPFNSEKKRGGLWSTYTLERRALDHEGFVAEGPNMNVAFVTKEKELIMPHFDKILSGCTAKRVLTLAEKLLSKGKLRGIRMKHVTVEEGKSAAEMMLIGSGVLVCPVVQWDEQVIRDDIGLSMGIQGTEVAKESSDIIILDDNFASVVKRFLVQSLQLFAWS* | 248 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy16g0544 | 247 | PANTHER | CATION TRANSPORTING ATPASE | 1 | 97 | - | - | |
| Ahy16g0544 | 247 | PANTHER | CATION TRANSPORTING ATPASE | 202 | 234 | - | - | |
| Ahy16g0544 | 247 | Pfam | Cation transport ATPase (P-type) | 46 | 95 | - | - | |
| Ahy16g0544 | 247 | SUPERFAMILY | D-aminoacid aminotransferase-like PLP-dependent enzymes | 92 | 199 | IPR036038 | GO:0003824 | |
| Ahy16g0544 | 247 | Gene3D | - | 1 | 102 | IPR023299 | GO:0000166 | |
| Ahy16g0544 | 247 | Gene3D | - | 106 | 202 | IPR043132 | - | |
| Ahy16g0544 | 247 | Pfam | Amino-transferase class IV | 108 | 194 | IPR001544 | GO:0003824 | |
| Ahy16g0544 | 247 | Gene3D | - | 203 | 234 | IPR023214 | - | |
| Ahy16g0544 | 247 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 202 | 234 | - | - | |
| Ahy16g0544 | 247 | SUPERFAMILY | HAD-like | 203 | 235 | IPR036412 | - | |
| Ahy16g0544 | 247 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 1 | 97 | - | - | |
| Ahy16g0544 | 247 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 1 | 101 | IPR023299 | GO:0000166 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy16g0544 | Ahy-Chr16 | 10255283 | 10260356 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ahy16g0544 | 1 | 97 | Primary Pumps ATPases | AT3G21180 | 64.948 | 3.59e-38 | 139 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ahy16g0544 | - | - | ahf:112756342 | 462.611 |