Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0487 ATGGGGATGGCTGCTGCAGCTGCTACAGAGTCACAGCAGTTTCATGTGTTGGCTGTTGATGACAGCCTCATAGATAGGAAGCTTATTGAGAGGCTCCTAAGAACTTCTTCTTACCAAGTTACTACAGTTGATTCTGGGACCAAAGCTTTAGAATTTCTGGGCTTGCGTGAGAATGATGATGGCACCCCAAATACACCTTCTATTTCTCCTAACAATCATCAGGAGGTGGAGGTGAATATGGTTATAACAGATTACTGTATGCCTGGGATGACCGGCTATGATTTGCTCAAGAAAATCAAGGAATCTTCATCTCTTAGAAACATACCAGTGGTGATTATGTCATCTGAGAATGTGCCTTCAAGAATTAGCAGATGCTTGGAGGAAGGAGCTGAAGAATTTTTCTTGAAGCCAGTGAGGCTTTCAGATTTGAATAGGCTCAAACCACATATAATGAAGAGGAGCAAGTTGAAAGATCAAGATCAAAAGCAAGTGATACCAGAAAAGATTGATACTTTATTAGAAGTTCAAAAGCAGCATCAACCACAAGAAGAAGCACAGCCACAAGTGCAACCAAATTTAGAACAACAACAACAACAACAATCACTGCAACAAAACAACAACAATAACAATAACAGCAGCAACAAGAGGAAGAGCATGGAGCAGAGCCTTTCACCAGAGACCACTGACAGAACTAGACCAAGATACAGTGGCATAGCCACTGTGGTATGA 729 0.4156 MGMAAAAATESQQFHVLAVDDSLIDRKLIERLLRTSSYQVTTVDSGTKALEFLGLRENDDGTPNTPSISPNNHQEVEVNMVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNRLKPHIMKRSKLKDQDQKQVIPEKIDTLLEVQKQHQPQEEAQPQVQPNLEQQQQQQSLQQNNNNNNNSSNKRKSMEQSLSPETTDRTRPRYSGIATVV* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0487 242 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 238 IPR045279 GO:0009736
Ahy16g0487 242 Coils Coil 202 222 - -
Ahy16g0487 242 SMART REC_2 14 150 IPR001789 GO:0000160
Ahy16g0487 242 Pfam Response regulator receiver domain 16 143 IPR001789 GO:0000160
Ahy16g0487 242 Gene3D - 15 231 - -
Ahy16g0487 242 ProSiteProfiles Response regulatory domain profile. 15 151 IPR001789 GO:0000160
Ahy16g0487 242 MobiDBLite consensus disorder prediction 177 234 - -
Ahy16g0487 242 CDD REC_typeA_ARR 16 146 - -
Ahy16g0487 242 MobiDBLite consensus disorder prediction 177 242 - -
Ahy16g0487 242 SUPERFAMILY CheY-like 13 164 IPR011006 -
Ahy16g0487 242 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE 8 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0487 Ahy-Chr16 9054674 9057024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0487 1 242 Response Regulator Gene Family AT3G57040 59.922 1.78e-94 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy16g0487 Response_reg 1.90E-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0487 K14492 - gmx:100788079 298.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0487 16 9054674 9057024 Ahy6g0847 6 10626232 10628614 hybridization