Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0464 ATGGCGCGAAAACAAAAACCTGGTGCTCGGGAACCAAAACCAAAACCAAAACCTTTGTCTCCAATTTCCATCGGTAACTGCGAGGTCACTGTTGAGGCCAAAAACTTCACATGCAAATCCGAATCAAACAGCACCGTAATCTCTCTCCCGAGAAACGGAAAGATAATAGTATCAGTGGCACAAGAAGAGTATGCGAACAATGGAAATGCTACTGGGGATTTAAATTCCGATGATAGAGAACATGAGTTCATGCTTGTTAGTCCTAAAGATGATGCTGGGATAAGCAAATCCTACCTTCAGGAAGTTCTAGAGATGTATAAGGCAGAGCTACCAGGAATGAATTATGCTGCTAATACTGGAAAGCAATCAAAATTTCTTGAAAGATGTGTGACCAATGGGAAATATCGAACACTACTTCTTAATTCCAGTTCTGTTGAAGATTCCGGAAAGGTTATAGCTGCAATTACATATCAAATCATCCCTGCAGATACAGAATATGCAGAGATCCCACTTACAGCTGTGAGGGAAATCTACCAACGGAAGGGTTTTGGCCGTCTGTTGTTTCTGGAGCTACAGAAGAGACTTCAAAATATTGGTGTTCGTTCCATTTTCTGTTGGGGAGACAAAGAATCAGAAGGATTTTGGCTTAAACAGGGTTTTATATCAATAGCACAGGTTGATGCCAAAGGTAAAGCCCGCAGGTTTCCTGTAAAAGCTAGTATTCGCAAAGCATTATGCTTTCCTGGTGGTTCAACTCTCATGGCATGCCATCTAAGGACAGAATTCTCAGCCGATGCAGCTGACTCTATGCACTGTCTTCCTTCACCTCTCTGTCATCATTCCTTGACACCTGTCATTGCTGAAAATGAGCAGCTGAAATGTTCAGGATTGCTGCACATTGATTTGAACCTGTCTAATCATTCAACCCATATTATAGAAAGTAAAGATAAAATTCAAGCTGAAGGTTTGATGAAAGCTGGATCGTCAAGAGAATATGGCAAACTGTGTGGGTTTGACAGTCACAATCTCCAACATGGCTGCAGTGACATTTTTCCTTTTGTCAGAGCATATGAGGACAGAAATGCTACTGCTGCAGAAAATTCACAGGATGAAATTGATGATAACATGAAGCTTTGTCATCTTTTTCCAAAAGCTGCAAAAAGGGGCTGGGAATCCTCTATATCCTCATTGAAATCTAAAAGGGTGAAGGGAAGCCAGTTGGCTGACTGTCGATCAGATTCTAGCAACGGTTTTACATCAGAGGCTAATAGGCCCAATCCTTGTTTTCAAGAAGTCCCTCGCGTTGATCCTCTGAGTGCAGAAGTTTCTGAGAAATATATGGAGGATCATGTACAATTAGAAGCACCCAACGACAAGGAACTGCCGTTGGCTAAACAATCCTTTAGAATTATGTTAATGAATATTGCAGATGATACTAAGAGAACACAGCTTTCAAAGGTTATTGAAGACCTTGGTGGAACTGTTGCGTATGATGGAAGCATAATAACACATGTTGTCACAGGAAAAGTGAGGAAAACTATGAATTTCTGCACTGCTCTCTGTTCTGGGGCTTGGGTGCTCTCATCTAGTTGGTTAAAGCAAAGCTTTCGTGAAGGCAGATTCGTCGATGAGTTGCCTCACATACTGAATGATGAGGAGTACATGCTGAAGCACAAATCTGATTTAAAAAGTGCAATCTTCCGAGCAAAAGCTAGCCCCCATTCTTTGTTTAAGGGCTATAATGTATGCATTGCAGCTCATGTTCGAACTCCTGCCGACACTCTATCTGCTATTGTCAGGTCTGCTGGTGGTAATGTTATCAATGGGCTGGAAAAAGTAAACGAGACATCAACAACAATCTTTGTGACATGCGAAGAAGATACAGAAGAAGCAATGATGGCTGCAAAGAAAGGAATCCGGACTTTCAGCAGTGAGTGGTTTATGAACTGTGTTATGAGACAGGAGCTTGACTTGCAGGCCTCCCAATTCGCGCAGTCCTTATGA 2004 0.4192 MARKQKPGAREPKPKPKPLSPISIGNCEVTVEAKNFTCKSESNSTVISLPRNGKIIVSVAQEEYANNGNATGDLNSDDREHEFMLVSPKDDAGISKSYLQEVLEMYKAELPGMNYAANTGKQSKFLERCVTNGKYRTLLLNSSSVEDSGKVIAAITYQIIPADTEYAEIPLTAVREIYQRKGFGRLLFLELQKRLQNIGVRSIFCWGDKESEGFWLKQGFISIAQVDAKGKARRFPVKASIRKALCFPGGSTLMACHLRTEFSADAADSMHCLPSPLCHHSLTPVIAENEQLKCSGLLHIDLNLSNHSTHIIESKDKIQAEGLMKAGSSREYGKLCGFDSHNLQHGCSDIFPFVRAYEDRNATAAENSQDEIDDNMKLCHLFPKAAKRGWESSISSLKSKRVKGSQLADCRSDSSNGFTSEANRPNPCFQEVPRVDPLSAEVSEKYMEDHVQLEAPNDKELPLAKQSFRIMLMNIADDTKRTQLSKVIEDLGGTVAYDGSIITHVVTGKVRKTMNFCTALCSGAWVLSSSWLKQSFREGRFVDELPHILNDEEYMLKHKSDLKSAIFRAKASPHSLFKGYNVCIAAHVRTPADTLSAIVRSAGGNVINGLEKVNETSTTIFVTCEEDTEEAMMAAKKGIRTFSSEWFMNCVMRQELDLQASQFAQSL* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0464 667 Pfam Acetyltransferase (GNAT) family 145 220 IPR000182 GO:0016407
Ahy16g0464 667 Pfam BRCA1 C Terminus (BRCT) domain 460 536 IPR001357 -
Ahy16g0464 667 Pfam BRCA1 C Terminus (BRCT) domain 573 651 IPR001357 -
Ahy16g0464 667 Gene3D BRCT domain 457 573 IPR036420 -
Ahy16g0464 667 SUPERFAMILY BRCT domain 571 656 IPR036420 -
Ahy16g0464 667 Gene3D BRCT domain 574 666 IPR036420 -
Ahy16g0464 667 SUPERFAMILY BRCT domain 468 553 IPR036420 -
Ahy16g0464 667 Gene3D - 80 261 - -
Ahy16g0464 667 ProSiteProfiles BRCT domain profile. 572 656 IPR001357 -
Ahy16g0464 667 MobiDBLite consensus disorder prediction 1 23 - -
Ahy16g0464 667 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 14 667 - -
Ahy16g0464 667 ProSiteProfiles BRCT domain profile. 466 549 IPR001357 -
Ahy16g0464 667 PANTHER N-ACETYLTRANSFERASE 14 667 - -
Ahy16g0464 667 CDD BRCT_PAXIP1_rpt6_like 576 657 - -
Ahy16g0464 667 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 145 225 IPR016181 -
Ahy16g0464 667 CDD NAT_SF 145 206 - -
Ahy16g0464 667 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 84 242 IPR000182 GO:0016407
Ahy16g0464 667 SMART BRCT_7 574 654 IPR001357 -
Ahy16g0464 667 SMART BRCT_7 460 539 IPR001357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0464 Ahy-Chr16 8708469 8714572 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Ahy16g0464 BRCT 7.40E-05 CL0459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0464 - - aip:107645523 1328.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0464 16 8708469 8714572 Ahy16g0464 16 8708469 8714572 ECH
Ahy16g0464 16 8708469 8714572 Ahy6g0868 6 10952009 10958412 hybridization