Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0440 ATGTTAGGAGGTAGTGGTGAATGTGTTTGCTTCTCTGTGTCTTGGCAAGTGGAGGCTGTGAGGATGTTGGAATCATGTTGGATAGTAGATGAGGTGGTAATAATGGCATCAAGTAGCAAGTTTTGGAAGGATGCGTATATGTGGAATGAGCCTCTTGCGGATTACTGGATGGAGGGCAATGCTGTTGGTTGTACTCTTAGCAGGTGTGAGGGTTATGTTGTGAGAACTAATATTCTATGTGGTGACTATGATGTGATGAGTCTGATGCGTAGAAGAAATGCTAGATTGGACACAATGTTTGATACGAGAGTGGAGGAAGATGCTGAGTTATCCGATTGGGAAGGAAGGGGGGCTTCAATGTTGCCCGGCTTCTTGGGTTTGGATGGGTTGCGAGCAGAAGATGTTCTTGAAATGGAGTTCTCTTCACCTCAGGAGGCAGGCGGCTTCTATAACAATTACAGCCGACTGAAGGGCTTTGCATCACGGCGAGGCAAGACTGTTAGAAACACTGCCGGAGAGATCGTGCGGTACACTTTTGTTTGTAATAGGCAAGGATTTCGAGAGAAGAAATGGTTGGAAAAGGTTGATCGCAAAAGGGAGCATAAGGTAGTTACCCGATGCGGATGCATGGCGGAGATGAGGATAAAGAGGAAAGACGGTAGTGGGAGGTGGTATGTCTCGCGTTTTGTCGAGGAGCATAACCACGAACTTGCGTATGGGAAGCTTATTGATTATCTGCTGTCACACAGGAAGATATCTGAGGTAGAAGTTGCTCAGCTAACAAGCATGAGGGAGATTGGGATTAGCATACCTAAGATTTATGAGTCTTTCGCAGCACAACTAGGGGGTTTTAATCTGGTAACATTCACAAAGCAAGATATGTATAATGAGATACGGAAACAAAGAGGTCTGCAAGGCGGAGATGTAAGTGCGGCTATTAGGTACTTGGAAGGTCTGGCACGCATGGATGGGAAAATGTTTTGGCGTTACAAGTTGGGGACAGGGCAACACCTATGCAACTTGTTTTGGAGCGACGGTCGTTGCCAGGAAGATTATGGGATTTTCGGCGATGTGCTAGCATTCGACGCTACGTATGGCCGCAACAAGTACAACCTACCCGTTGTAGTCTTTTCTGGAGTAAACCACCACAACCAGACATGCGTATTTGGAACAGCAATGGTCTCCTGCGAATCACAGGAGTCATATATTTGGGTTCTTCGCCAGTTTCTGGAATGCATGCAAGGTAAGGCACCACAATCGGTCATCACGGATGGCGACCCAGCCATGCGGATAGCAATCCAGTCTGTATTTCCTGATGCACATCATCGGTTGTGTGCCTGGCATCTGCTGAGGAACGCGACTGCTAACATAAGCGACTCGAGATTCACACAAATGTTTAGACACTGCATGTTGGCAGATATGGAAATCGATGAGTTCGAAGCGCATTGGGAGGCAATGCTCAACGAGTGCGGTGTTAGGGAGGTTGAGTGGGTTAAGGACTTGTACACCAAAAAGCACGCTTGGGCCACCGCATACATCCGCGGTAGATTTTTTGCTGGAGTACGGACTACCTCTAGGTGCGAGTCACTACATGCCAAACTAGGGAGGTTTGTCGAGAGCAGGTACGGGGTGTTAGAATTTGTCAGAAATTTTCAAAGGTGTGTGGATTTTCTGCGTGACACCGAGGACGAGCTAGACTTTCATTCATGGTACGGAACACCTGTGCTATAA 1731 0.4731 MLGGSGECVCFSVSWQVEAVRMLESCWIVDEVVIMASSSKFWKDAYMWNEPLADYWMEGNAVGCTLSRCEGYVVRTNILCGDYDVMSLMRRRNARLDTMFDTRVEEDAELSDWEGRGASMLPGFLGLDGLRAEDVLEMEFSSPQEAGGFYNNYSRLKGFASRRGKTVRNTAGEIVRYTFVCNRQGFREKKWLEKVDRKREHKVVTRCGCMAEMRIKRKDGSGRWYVSRFVEEHNHELAYGKLIDYLLSHRKISEVEVAQLTSMREIGISIPKIYESFAAQLGGFNLVTFTKQDMYNEIRKQRGLQGGDVSAAIRYLEGLARMDGKMFWRYKLGTGQHLCNLFWSDGRCQEDYGIFGDVLAFDATYGRNKYNLPVVVFSGVNHHNQTCVFGTAMVSCESQESYIWVLRQFLECMQGKAPQSVITDGDPAMRIAIQSVFPDAHHRLCAWHLLRNATANISDSRFTQMFRHCMLADMEIDEFEAHWEAMLNECGVREVEWVKDLYTKKHAWATAYIRGRFFAGVRTTSRCESLHAKLGRFVESRYGVLEFVRNFQRCVDFLRDTEDELDFHSWYGTPVL* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0440 576 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 134 568 IPR031052 GO:0006355
Ahy16g0440 576 Pfam FAR1 DNA-binding domain 149 238 IPR004330 -
Ahy16g0440 576 Pfam MULE transposase domain 358 452 IPR018289 -
Ahy16g0440 576 PANTHER OS02G0262500 PROTEIN 134 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0440 Ahy-Chr16 8302651 8305075 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy16g0440 MULE 3.10E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0440 - - aip:107620408 1056.59