Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0432 ATGGTGGATTCCCCAGCAATGGAGTTGCATGCAGAAGTGATGGAGAATGAAAATAATAATGTTGTTATTAGGAGGGAAGTGTGCTTGGTTTGGGAAGAATTGACAGTGGTTATTAACAGCGGCAAGAGCAGTAATAATAGTGAAAGAAGGAAGAAAGTGTTGAATGGAATAAGTGGATATGCTGAACCAAACAGAATCATGGCTCTAATTGGTCCTTCTGGTGCTGGCAAATCCACCTTCCTTGATGCTCTTGCTGGAAGACTTGCAAGCAATGTCAGCATTACTGGAAATGTGCTACTGAATGGCACTAAGAGAACCACATCCTCTAGAGATCTTTCTTATGTAACACAAGAAGACCATTTCTTAGGAACACTAACTGTGAGGGAAACACTCACATATGCTGCTTATCTGAGACTTGCTGCAAACATGGCCAGTGATGAGATTGACAAGGTTGTAGCTAAGACGCTCGACGAAATGGGTCTTCAAGATTGTGCAGAGAGCAGGCTTGGGAATTGGCATTCAAGAGGAATAAGTAAAGGAGAGAAGAGAAGACTCAGCATTGGCATTGAAATCTTAACTCAGCCTCATATACTTTTGCTTGATGAACCTACCAGTGGATTGGATAGTGCTGCTGCTTTCTTTGTCATTTCATCTCTCAGAAGCATTGCACATGATGGCAGAATTGTTATTTGCTCCATTCACCAACTTAGCAGTGAAGTTTTCAACCTCTTTGATGACATGGTGATCCTCGCAGGAGGCGAAACTGTGTATTTTGGAGAAAGGACTAAAGCTGTTAAGTTCTTTGAAGATGCAGGGTTTCCTTGTCCAACAAGAAAGAACCCTCCTGAGCACTTCCTTCGTTGCATCAGCCCCGAATTCGATAGTGTTCTAACTTTGATACAGTCCAAGAATGCCAATAATGAAGCACCATCATCATGGAATTCTCTAATGAATATGACAACAGAGGAGATTAAATGGAAACTTATAAACTGTTTCAAGAATTCTAGGCAGTTAGCAAATGCAAGGGAAAAGATCAGAGAAATCAAACTAAGAAAAGAACCTCCAATAGAGAGGGCATATGATACTAGAACACTGAAGCAGCTATGCACATTGACTCATAGATCATTCCTTAACATGACCAGAGACATTGGTTACTATTGGTTAAGGATTCTGTTCTACATGTTAGTATCAGTGTGTGCTGGTTTTCTTTATCTAAATGTAGGAACTAGTAATAGTGCAATCTTATCAAGAAGCAAGATTGATGGATTCATCTATGGCTTCATGATCTTTCTGTGCATTGGTGGCTTACCCTTCTTCCTTGAGGACTTAAAGGTCTTCGAGCGCGAAAGATTCGGAAGGCATTATGGAGAGGCAGTTTATGTTCTTTCGAGTTTCATCTCGTCACTTCCTTTTGTTGTTTTCATTTCCCTTACTTCAGGAACAACACTTTACCACATGGTGAATTTTCACCCTGGATTCTCTCATTACTGCTACTTTTGCATAAACCTCTTCTGCAGCATTTCTGTCACAGAAGGGTGCATGCTTTTAGTTGCTGCTCTTGTTTCCAACCAGCTCCTTGCTATTGGAACATCAGCTGCTATAACTATACTGATGATGATGCCATCAAATGCATTTCGAAGAATGATTGACATTCCGAAATTCTTCTGGCGCTATCCCATGTCCTACATCAGTTATATCGCTTGGTCAATACAGGGGCAATACAAGAATGACCTGATTGGACTTGAATTTGAAGGAATGATGCCAGGAGACAGAAAGATAAAGGGTGAAGTGATACTTGAAGAAATGTTTGGAATAAGAACAGATTATTCAAAATGGTGGGACATAGGAGCCTTAGTTTGCTTGTTAATATCATACAGATTGATGTTTTTCTTGGTTCTTAAGCATAGGGAGAGAGCTTCATCACTATTTCACACCATTTTACTCACAAGATCCTCCCTCAAACTCAAACTCAATCTCAATCTCAATTTCAATCACAAATATATTGCTACCAAGAGACACCATTCCCTATATCCTTTCTCATCTCAACATGGATTTACCTCTCCAATAATATCCTAG 2076 0.4008 MVDSPAMELHAEVMENENNNVVIRREVCLVWEELTVVINSGKSSNNSERRKKVLNGISGYAEPNRIMALIGPSGAGKSTFLDALAGRLASNVSITGNVLLNGTKRTTSSRDLSYVTQEDHFLGTLTVRETLTYAAYLRLAANMASDEIDKVVAKTLDEMGLQDCAESRLGNWHSRGISKGEKRRLSIGIEILTQPHILLLDEPTSGLDSAAAFFVISSLRSIAHDGRIVICSIHQLSSEVFNLFDDMVILAGGETVYFGERTKAVKFFEDAGFPCPTRKNPPEHFLRCISPEFDSVLTLIQSKNANNEAPSSWNSLMNMTTEEIKWKLINCFKNSRQLANAREKIREIKLRKEPPIERAYDTRTLKQLCTLTHRSFLNMTRDIGYYWLRILFYMLVSVCAGFLYLNVGTSNSAILSRSKIDGFIYGFMIFLCIGGLPFFLEDLKVFERERFGRHYGEAVYVLSSFISSLPFVVFISLTSGTTLYHMVNFHPGFSHYCYFCINLFCSISVTEGCMLLVAALVSNQLLAIGTSAAITILMMMPSNAFRRMIDIPKFFWRYPMSYISYIAWSIQGQYKNDLIGLEFEGMMPGDRKIKGEVILEEMFGIRTDYSKWWDIGALVCLLISYRLMFFLVLKHRERASSLFHTILLTRSSLKLKLNLNLNFNHKYIATKRHHSLYPFSSQHGFTSPIIS* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0432 691 Pfam ABC transporter 54 205 IPR003439 GO:0005524
Ahy16g0432 691 SMART AAA_5 63 254 IPR003593 -
Ahy16g0432 691 Pfam ABC-2 type transporter 367 573 IPR013525 GO:0016020|GO:0140359
Ahy16g0432 691 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 29 277 IPR003439 GO:0005524
Ahy16g0432 691 CDD ABCG_EPDR 29 259 - -
Ahy16g0432 691 ProSitePatterns ABC transporters family signature. 177 191 IPR017871 GO:0005524
Ahy16g0432 691 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 28 650 - -
Ahy16g0432 691 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 28 650 - -
Ahy16g0432 691 Pfam ABC-2 type transporter 234 313 IPR043926 GO:0140359
Ahy16g0432 691 Gene3D - 35 271 IPR027417 -
Ahy16g0432 691 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 271 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0432 Ahy-Chr16 8229755 8234338 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0432 52 246 Calmodulin-binding Proteins AT2G36910 27.962 3.03e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0432 - K05681 aip:107646291 1339.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0432 16 8229755 8234338 Ahy6g0897 6 11458263 11462757 hybridization