Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0427 ATGGAGGCAACAATATTATGTGACAATAATAATAATAATAAAGGGTTATTATTGGAATGTGGTGGTGGTGGTGGAAGGAAGTGCAATAATCCACCACCGTTCTTGTTGAAGACATACATGCTTGTGGAGGATCCGGCCACCGACGAAGTCGTATCGTGGAATGCCGACGGCACGGCGTTCGTGGTGTGGCAGCCGGCGGAGTTTGCCCGTGATCTCCTCCCTACACTCTTCAAGCATAGCAACTTCTCTAGCTTCGTTCGCCAGCTCAATACCTATGGTTTTCGTAAAGTTGCAACAAGCAGATGGGAATTCTCCAATGAGAAGTTCAAGAAAGGTGAAAGAGAAATGCTATGTGAAATTCGAAGAAGAAGAGCATGGACAAGCAAGCAACGGAATGCAGCACAAAATCAAGGTGCACCCCAAGACTCCGATGAAGATCAAAGGTCTTCATCGACTTCTTCGTCTTCGGGTTACACCACTCTAGTTGATGAGAACAAGCGCCTCAAGAAGGAGAATGGGGTGTTGAGTTTAGAGCTCACAACCATGAAGAGGAAGTGTAGGGAACTGCTTGATTTGGTGGCGAAATACTCGCATGCTCAGGAGGAGGAAGAGGACGAGGACGAGAACGAGGCCGAGGCCGGAAGGCCAATGCTGTTTGGAGTAAGATTGGATGTTCAAGGGCAGAGGCAGGTGAAGAGGAAGAGAGACGAGATACGTGAAAGCGCAAGCATTTTGCTCTCTCAATCATGCAAATAG 756 0.4775 MEATILCDNNNNNKGLLLECGGGGGRKCNNPPPFLLKTYMLVEDPATDEVVSWNADGTAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFSNEKFKKGEREMLCEIRRRRAWTSKQRNAAQNQGAPQDSDEDQRSSSTSSSSGYTTLVDENKRLKKENGVLSLELTTMKRKCRELLDLVAKYSHAQEEEEDEDENEAEAGRPMLFGVRLDVQGQRQVKRKRDEIRESASILLSQSCK* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0427 251 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 26 251 IPR027725 -
Ahy16g0427 251 Pfam HSF-type DNA-binding 34 123 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy16g0427 251 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-3 26 251 - -
Ahy16g0427 251 ProSitePatterns HSF-type DNA-binding domain signature. 73 97 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy16g0427 251 SMART hsfneu3 30 123 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy16g0427 251 MobiDBLite consensus disorder prediction 128 163 - -
Ahy16g0427 251 SUPERFAMILY "Winged helix" DNA-binding domain 29 123 IPR036390 -
Ahy16g0427 251 MobiDBLite consensus disorder prediction 129 162 - -
Ahy16g0427 251 PRINTS Heat shock factor (HSF) domain signature 85 97 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy16g0427 251 PRINTS Heat shock factor (HSF) domain signature 34 57 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy16g0427 251 PRINTS Heat shock factor (HSF) domain signature 72 84 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy16g0427 251 MobiDBLite consensus disorder prediction 199 219 - -
Ahy16g0427 251 Gene3D - 26 124 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0427 Ahy-Chr16 8160371 8163904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0427 8 224 HSF AT2G41690 54.274 3.88e-73 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Ahy16g0427 HSF_DNA-bind 5.70E-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0427 K09419 - gmx:100802739 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0427 16 8160371 8163904 Ahy6g0901 6 11553694 11557332 hybridization