Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0382 ATGGCGAAGAAGGACAAAGCTAGGGTTCCCGATGACGAACAACAAATCGATTCTGAACCTAACAACAACCATCAGACCCTCTACGAGGTTCTTGGTGTGGAAAGAACAGCCTCTCAGCAGGAAATAAAGAAAGCATACTACAAGCTCGCATTGAGGCTTCATCCTGATAAGAACCCTGGTGATGAGGAAGCTAAAGAGAAGTTTCAGCAATTGCAAAAAGTAATCTCAATTCTTGGGGATGAAGAGAAACGATCTCTTTATGATCAGACCGGTTGTGTTGATGATGCTGACCTTTCTGGTGATGTTGTTCGGAATCTTAGTGAGTTTTTCAGAACAATGTATAAGAAGGTAACTGAAGCTGATATTGAGGAGTTTGAAGCTAACTATAGGGGATCTGACTCAGAGAAAAATGACTTAATTGATTTGTACAAGAAGTGCAAGGGTAATATGGACAGGCTTTTTTGTTCAATGCTTTGTTCAGATCCTAAATTTGATTCACATCGATTCAAGGATATACTTGACGAGGCAATTGCTGCTGGAGAACTAAAGGACACAAAAGCCTACCAAAAATGGGCGAAGAAAGTATCTGAAATCAAACCACCAACTAGTCCTTTAAAGAGGAGGGCGGAGTCTAGTAAGAAGCCAGAAACAGATCTTTATGCAATGATAGCACAACGTCAAAATCAGAGGAAAGATCGATTTGATTCATTGTTCTCATCACTGGCTTCAAAATACGGTGGAGGTGATATGCCTGAGCCCTCTGAAGAGGAATTTGAAGCTGCACAGAGAAAGCTGGATAGTGGAAGATCCTCAAAAAAGGCAAAGCAATCAAAGCGGAAGTAA 843 0.4104 MAKKDKARVPDDEQQIDSEPNNNHQTLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRSLYDQTGCVDDADLSGDVVRNLSEFFRTMYKKVTEADIEEFEANYRGSDSEKNDLIDLYKKCKGNMDRLFCSMLCSDPKFDSHRFKDILDEAIAAGELKDTKAYQKWAKKVSEIKPPTSPLKRRAESSKKPETDLYAMIAQRQNQRKDRFDSLFSSLASKYGGGDMPEPSEEEFEAAQRKLDSGRSSKKAKQSKRK* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0382 280 ProSiteProfiles dnaJ domain profile. 26 91 IPR001623 -
Ahy16g0382 280 CDD DnaJ 26 80 IPR001623 -
Ahy16g0382 280 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 3 276 - -
Ahy16g0382 280 MobiDBLite consensus disorder prediction 1 25 - -
Ahy16g0382 280 MobiDBLite consensus disorder prediction 199 280 - -
Ahy16g0382 280 MobiDBLite consensus disorder prediction 200 215 - -
Ahy16g0382 280 Gene3D DnaJ domain 11 100 IPR036869 -
Ahy16g0382 280 SUPERFAMILY Chaperone J-domain 24 97 IPR036869 -
Ahy16g0382 280 PRINTS DnaJ domain signature 28 46 IPR001623 -
Ahy16g0382 280 PRINTS DnaJ domain signature 83 102 IPR001623 -
Ahy16g0382 280 PRINTS DnaJ domain signature 63 83 IPR001623 -
Ahy16g0382 280 PRINTS DnaJ domain signature 46 61 IPR001623 -
Ahy16g0382 280 MobiDBLite consensus disorder prediction 1 18 - -
Ahy16g0382 280 Pfam DnaJ domain 27 88 IPR001623 -
Ahy16g0382 280 SMART dnaj_3 25 83 IPR001623 -
Ahy16g0382 280 MobiDBLite consensus disorder prediction 256 272 - -
Ahy16g0382 280 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 3 276 IPR042977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0382 Ahy-Chr16 7409658 7412381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0382 28 88 C2H2 Transcription Factor Family AT1G74250 39.394 7.60e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0382 K09529 - gmx:100781463 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0382 16 7409658 7412381 Ahy16g0382 16 7409658 7412381 ECH
Ahy16g0382 16 7409658 7412381 Ahy6g0943 6 12350953 12353726 hybridization
Ahy16g0382 16 7409658 7412381 Ahy12g1605 12 86813736 86816817 PCT
Ahy16g0382 16 7409658 7412381 Ahy2g1362 2 72228242 72231300 PCT
Ahy12g1605 12 86813736 86816817 Ahy16g0382 16 7409658 7412381 PCT
Ahy2g1362 2 72228242 72231300 Ahy16g0382 16 7409658 7412381 PCT