Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0369 ATGGATTCCAGTTCCCGTTATCACCAACAGCAGCTAAACTCATCGTCGTCATCAGCATCAGGATTGCTTCGATTTCGCTCTGCTCCTCCTTCAGTCCTCGAACAGTTACAGGTTGTTGAAGGTTCTTGTTCATCTGAACAGGAGAGGTCGTCGTCGTCGTCGTTCTCGAGATTCTTCAGCTCCAACAACAATAAGCCTTCTTCAACAACAAAACCGCCATCACTTTCTTCGATGAATTCGAATCATCGCTTCACCAGACTCCACAACTCGTCAACTGCACCTTCCGCTTCCACTTCCTCTGGAACGGATCTACCAAGGCAGAGCACTTTTCCAGCTTCGCATTTCTCCTTCCACGATAATAACGGGTATGATACTAATGCAAATACTATGACGAAAGGTGTTGGAAACTACAGTGGCAGTGATGAACTTAGTCTATCCACAATGAACAGATTCAATAACCAAATTAGCTTCTCATCATCAAGAAGCCCTTCTTCTTCAGCAACGGCAACTAATAATAATAACCGTAATGGTGGATTATTCTTCCCTAATTATGGTTCTTGGAATGAGACATCATACAAGAGGGACGACCAAAATAGGATTCATAAGTTAATTTTTTATGCTAATCAGAATGAAGAGTTTGGGAATAATAAAGTTGTTCATACACTATCGCATCAACTAAGTTTTCCAAAAGCGGAATCGGAGATGTTTGCAATGGAGAATATGATTCACTTCCCATTATCAGATTCTGTTCCATGTAAAATTAGAGCCAAAAGAGGATGTGCTACTCATCCCAGAAGCATTGCCGAAAGGGTGAGAAGAACTCGGATCAGTGAACGAATGAAATTATTAGAAGAGCTTGTTCCGAACATGGACAAGCAAGCCAGCACAGCAGACATGTTGGACATGGCTGTAGGATACATAAAAGATCTTCAGAAACAATTTAAGAATCTAAGTGACAAACGGGCTAAATGCAAGTGTATAAGGATGCAGAAATCAGATTCTTCAAAAAAATTTTGA 1017 0.409 MDSSSRYHQQQLNSSSSSASGLLRFRSAPPSVLEQLQVVEGSCSSEQERSSSSSFSRFFSSNNNKPSSTTKPPSLSSMNSNHRFTRLHNSSTAPSASTSSGTDLPRQSTFPASHFSFHDNNGYDTNANTMTKGVGNYSGSDELSLSTMNRFNNQISFSSSRSPSSSATATNNNNRNGGLFFPNYGSWNETSYKRDDQNRIHKLIFYANQNEEFGNNKVVHTLSHQLSFPKAESEMFAMENMIHFPLSDSVPCKIRAKRGCATHPRSIAERVRRTRISERMKLLEELVPNMDKQASTADMLDMAVGYIKDLQKQFKNLSDKRAKCKCIRMQKSDSSKKF* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0369 338 SMART finulus 266 316 IPR011598 GO:0046983
Ahy16g0369 338 Pfam Helix-loop-helix DNA-binding domain 265 311 IPR011598 GO:0046983
Ahy16g0369 338 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 260 310 IPR011598 GO:0046983
Ahy16g0369 338 MobiDBLite consensus disorder prediction 39 117 - -
Ahy16g0369 338 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 263 326 IPR036638 GO:0046983
Ahy16g0369 338 MobiDBLite consensus disorder prediction 156 175 - -
Ahy16g0369 338 Gene3D - 261 333 IPR036638 GO:0046983
Ahy16g0369 338 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 17 330 - -
Ahy16g0369 338 MobiDBLite consensus disorder prediction 1 23 - -
Ahy16g0369 338 PANTHER TRANSCRIPTION FACTOR BHLH130 17 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0369 Ahy-Chr16 7224047 7228598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0369 18 315 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 39.665 1.98e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy16g0369 HLH 1.10E-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0369 - - ahf:112758816 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0369 16 7224047 7228598 Ahy16g0369 16 7224047 7228598 ECH
Ahy16g0369 16 7224047 7228598 Ahy18g0329 18 2775199 2778433 ECH
Ahy16g0369 16 7224047 7228598 Ahy13g0570 13 5952498 5956602 ECH
Ahy16g0369 16 7224047 7228598 Ahy6g0959 6 12661315 12665701 hybridization
Ahy16g0369 16 7224047 7228598 Ahy12g1618 12 87721576 87724841 PCT
Ahy16g0369 16 7224047 7228598 Ahy2g1386 2 73674522 73677668 PCT
Ahy12g1618 12 87721576 87724841 Ahy16g0369 16 7224047 7228598 PCT
Ahy2g1386 2 73674522 73677668 Ahy16g0369 16 7224047 7228598 PCT