Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0355 ATGAGTCTCCAAACCAATTTCTTATCTATTTTGGTTCTCTTGGCTGCAGTTTTTGCATCTTTGCATCTCATAAATCCAAATGAACAGTTCCTCAACATTTTCAAAGACTTCACTATAACACCCTTCTCATCATATTCATATGCATGTTTGCAACTACCTTATATATGCATCTTCTTCAGAGGCCATCATCATAATCATCATCATAACAAGAAACACCCTGATGATGATGATAGTGGAAATGCTGGTTCCATTTGTGATGATTTTCCACCAGGGATTCCACCTCCAAGCACCAACACCACTTCTTATCTCTGTGTTGATCAAAAAGGTTGCTGCAATTTCACAACAGTACAAGCAGCCGTTAATGCAGTTCCAGATTTAAGCCAAAAAAGAACCATAATTTGGATTAACAAGGGCATATACTATGAGAAAGTAATGGTCCCAAGAACCAAAGCCAACATAACATTTCAAGGACAAGGTTACACTTCAACCGCAATTGCATGGAATGACACGGCAAAGTCAGCAAATGGCACATTCTATAGTGGTTCCGTACAAGTTTTTGCATCCAACTTCATTGCCAAGAACATAAGCTTCATGAACTTGGCACCAATGCCAAGTCCTGGAGTTGAAGGAGCACAAGCAGTAGCAATCAGAATATCAGGAGATCAAGCTGAATTCAAGGGATGTGGATTCTTTGGAGCACAAGACACCCTTCATGATGATAAGGGTCGCCATTACTTTAAGGATTGCTATATCCAAGGCTCAATTGATTTCATATTTGGCGATGGAAGGTCCCTTTACGAGAATTGTGAAATAGTTTCTATAGCGAATCCAGTGCCACAAGGATACAGGAGCATAAATGGTGCAGTGACAGCTCATGGAAGAGTGTCCATGGATGATAACACAGGATTTGTGTTTGTGAACAGCACAATAGGAGGGAGTGGGAGAATATGGTTAGGAAGGGCATGGAGACCATACTCACGTGTTGTTTTTGTGTCAACAACAATGTCAGATATCATTGCCCCTGAAGGTTGGAACGATTTCAATGACCCTTCAAGGGATCAGACCATATTCTATGGAGAGTACAATTGCTCTGGTCCCGGAGCTAGCATGGCAATGAGGGCACCATATGTGCAGAGATTAAACGATACACAAGCTCTTCCATTCTTCAACATAACTTTTATTGATGGTGACCAATGGTTGGAAACTTACACACAATTAATAACCTAA 1227 0.4075 MSLQTNFLSILVLLAAVFASLHLINPNEQFLNIFKDFTITPFSSYSYACLQLPYICIFFRGHHHNHHHNKKHPDDDDSGNAGSICDDFPPGIPPPSTNTTSYLCVDQKGCCNFTTVQAAVNAVPDLSQKRTIIWINKGIYYEKVMVPRTKANITFQGQGYTSTAIAWNDTAKSANGTFYSGSVQVFASNFIAKNISFMNLAPMPSPGVEGAQAVAIRISGDQAEFKGCGFFGAQDTLHDDKGRHYFKDCYIQGSIDFIFGDGRSLYENCEIVSIANPVPQGYRSINGAVTAHGRVSMDDNTGFVFVNSTIGGSGRIWLGRAWRPYSRVVFVSTTMSDIIAPEGWNDFNDPSRDQTIFYGEYNCSGPGASMAMRAPYVQRLNDTQALPFFNITFIDGDQWLETYTQLIT* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0355 408 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 11 403 - -
Ahy16g0355 408 SUPERFAMILY Pectin lyase-like 101 401 IPR011050 -
Ahy16g0355 408 Gene3D - 96 406 IPR012334 -
Ahy16g0355 408 Pfam Pectinesterase 104 397 IPR000070 GO:0030599|GO:0042545
Ahy16g0355 408 ProSitePatterns Pectinesterase signature 2. 251 260 IPR033131 -
Ahy16g0355 408 PANTHER PECTINESTERASE 8-RELATED 11 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0355 Ahy-Chr16 7075134 7076926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0355 77 401 Carbohydrate Esterase AT1G05310 72.000 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0355 - - ahf:112696095 818.92