Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0353 ATGGCAGGGCCTTCTTTCTATGCCTCCTGTCTTTCCTCCTCCAGCAATTTGGGGACATCTTGGTTGGTATTAAAAACTCACAATGCAAGGGCCGTGCCAGGGAAACTACGCTGGAGGAGCGGTCTTACAATAAAAGCAGAAGTGAAGTTTGTTAATGCTGAACAAGCAAAGGAGCTTGTAACAGTTGATGGATATACTGTTCTAGATGTACGCGACAAAACTCAGTTTGAGAGAGCTCACATAAAATCCTGCTATCATGTGCCTCTCTTTGTTGAAAATCAAGACAATGATCCTGGTACCATTGTAAAAAGGACTCTGCACAATAATTTCTCTGGGTTGTTCTTTGGTTTACCATTCACCAAGCCGAATCCTAATTTTGTACAAACGGTCAAGAGTCAGTTTTCGCCCGAAACTAAACTTCTGGTTGTATGTCAGGAAGGACTGAGGTCTGCCGCAGCTGCAAATAAACTAGAGCAGGCCGGTTTCTCAAATGTAGCATGCATAACATCTGGCCTTCAAACTGTAAAACCAGGTACATTTGATTCTGTGGGATCCAAGGACTTGCAAGATGCCGGCAAAGCTGGTTTGGTGACAATCCAAGGGAAAATCTCAACTGTATTGGGAACAATTCTTGTTTGTGCATATTTGTTCATTACCTTCTTTCCTGACCAAGCTGAGAAGATATTCCAACTGGTCCCTGCAGGCTAA 708 0.4336 MAGPSFYASCLSSSSNLGTSWLVLKTHNARAVPGKLRWRSGLTIKAEVKFVNAEQAKELVTVDGYTVLDVRDKTQFERAHIKSCYHVPLFVENQDNDPGTIVKRTLHNNFSGLFFGLPFTKPNPNFVQTVKSQFSPETKLLVVCQEGLRSAAAANKLEQAGFSNVACITSGLQTVKPGTFDSVGSKDLQDAGKAGLVTIQGKISTVLGTILVCAYLFITFFPDQAEKIFQLVPAG* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0353 235 SMART rhod_4 51 181 IPR001763 -
Ahy16g0353 235 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC 1 234 IPR044615 -
Ahy16g0353 235 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 45 173 IPR036873 -
Ahy16g0353 235 ProSiteProfiles Rhodanese domain profile. 61 184 IPR001763 -
Ahy16g0353 235 Pfam Rhodanese-like domain 53 173 IPR001763 -
Ahy16g0353 235 CDD RHOD 55 176 - -
Ahy16g0353 235 Gene3D - 49 179 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0353 Ahy-Chr16 7047615 7050427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0353 9 229 Sulfurtransferasese or Rhodanese AT2G42220 66.968 7.61e-113 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0353 - - ccaj:109797004 392.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0353 16 7047615 7050427 Ahy16g0353 16 7047615 7050427 ECH
Ahy16g0353 16 7047615 7050427 Ahy6g0978 6 12881514 12884353 hybridization