Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0346 ATGTACCAATATCTGTACGGAAGTAGTAGTGGTGAGTGCTGGGAACAAGGTCAGAGTAGTTATGAGCCCTATTATGATGAGGTTCCTGCTTCTGCTTGGAACTTTGAGCTTCCATTAACAACAGGAACAGTTGTTGATGCAGTTGAGTCTTCTAGTATTAGCAGTAGTAGTGCAGATAGCTATTCCTCTTATGAAAGATGCAACACTATTCCTTCTTCATACTCTGATGTTGCTGCTAATGATGTGCTAATCTTCCATCAACACTATCCACAACAACATCATGTTCATAGTAATAAACTACTCATTGGTGATGATCATGATCAATATGATGCTACAGATCATCATGAGAAGCCTCTTCAGATTTGCTTTCAAACAAATCAGACAGAAAAGCAAGGCTATGTGAGTGGTTCTAGCAACTGTGGTTATAGGAGAGGTCCATCATCATCATCGTCATCATCGATTAAAAGAAGAATAAGATGGACCAAAGATCTGCATGAGCCATTCATGACCGTTGTTAATAGACTCGGTGGTCCGCATAAGGCAAAGCCTAAGGCTATATTAGATATGATGAAATCTGATTTGTTGTCAATTACACACATTAAAAGTCACTTGCAGAAATATAGGTCTACAATATGGCACCACAAAGCTTCACATGAAAGATCATTTGAGGAAGGAGATAAAACAGATGTCACTCATCAGCTTCAACACAAAATCAGACAAATACAAATTGAGGAATCACAACAACTTCAACAAGAGGTCCGCAGGAGTATTCATCAACAACTGGAGATGCAACGAACTTTGCAAATGCTGATTGAACAGCAAAGGGAGCAGCTCAAGATGATGTTAGATCAACAAAAAGAAAGAAACAAAAGTGGGAAAGAAATTAAATAA 891 0.3838 MYQYLYGSSSGECWEQGQSSYEPYYDEVPASAWNFELPLTTGTVVDAVESSSISSSSADSYSSYERCNTIPSSYSDVAANDVLIFHQHYPQQHHVHSNKLLIGDDHDQYDATDHHEKPLQICFQTNQTEKQGYVSGSSNCGYRRGPSSSSSSSIKRRIRWTKDLHEPFMTVVNRLGGPHKAKPKAILDMMKSDLLSITHIKSHLQKYRSTIWHHKASHERSFEEGDKTDVTHQLQHKIRQIQIEESQQLQQEVRRSIHQQLEMQRTLQMLIEQQREQLKMMLDQQKERNKSGKEIK* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0346 296 Coils Coil 268 288 - -
Ahy16g0346 296 Gene3D - 154 211 - -
Ahy16g0346 296 SUPERFAMILY Homeodomain-like 154 210 IPR009057 -
Ahy16g0346 296 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 155 209 IPR006447 GO:0003677
Ahy16g0346 296 Pfam Myb-like DNA-binding domain 159 208 IPR001005 -
Ahy16g0346 296 MobiDBLite consensus disorder prediction 134 155 - -
Ahy16g0346 296 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 48 294 - -
Ahy16g0346 296 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 48 294 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0346 Ahy-Chr16 6981328 6984315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0346 147 285 G2-like Transcription Factor Family AT4G28610 42.857 1.88e-28 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy16g0346 None None None