Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0345 ATGACCAAAAAAGAAAGAGGAATGATTCAACAAAGCCAAGGAGGACTATTTGATACCATACAGTGTTGGAACATGGTTGGAGGAGGATCACGGCCGCCACTGCCGCCACAAATAGGCCCTGCTGCCACCATCATGAGCCGGTTCGAGTCGCCGGCTTCTGCCTTCTATGCAGCAGAACTCTGCATGGGGTTTGCAGAATATGAACACTCTCAGGCTCAGTTCTCTAAGATGAATAATAATAATAATAATAATGATTTGGAATTCCCTTTGTATCAAAGGGACAAATTTGATCTCTCAAACACTTTGCAAGCAATGGTGAATTCTCAATTCAATACCAAAAATCAATGCTTTAGATCATCCAACAAAATCCCATGTGACAATTTTCCTGCCAGAAAGTTCCATCACCAACAGAAGTTCTTCACTGATGCCATGACTTCACCATTTCCTAACAAAGGAAATCAAGATAATATAGTGAGCTTTGATTCTTATCAAGATAGGTCTCCAACACCTTCTTCAGGAGGAAGTGTATCAGCAAACTCTGCTTCTAATGGGGTAACCATATCGAGTAAGACGCGTATAAGATGGACTCAGGATCTTCATGAAAAGTTTGTTGAATGTGTGAATCGCCTTGGTGGTGCTGATAAGGCAACACCAAAGGCTGTATTGAAGATGATGGACTCAGATGGATTAACAATCTTTCATGTCAAAAGCCATTTGCAGAAATATAGAATTGCTAAGTACATGCCTGACCCAATTCATAATGGGAAATCTGAGAAAAGAATCCACATAGAGAATCTTCAACATCAACATCTTCATCTTGATATGAAGAGTGGAATTCAAATTAGAGAAGCACTTCAACAACAATTAGATGCACAAAAGCTTCTTCATGAACAACTAGAGAATCAGAGAAAGTTGCAGCTGCGAATCGAGGAACAAGGTAGGCAGTTGAAGAAAATGTTTGAAGAGCAGCAAAAAGCAACGAATGAACTTTTGAATTGTCAGAATATAATAACCAAAGATGATACATAA 1029 0.3936 MTKKERGMIQQSQGGLFDTIQCWNMVGGGSRPPLPPQIGPAATIMSRFESPASAFYAAELCMGFAEYEHSQAQFSKMNNNNNNNDLEFPLYQRDKFDLSNTLQAMVNSQFNTKNQCFRSSNKIPCDNFPARKFHHQQKFFTDAMTSPFPNKGNQDNIVSFDSYQDRSPTPSSGGSVSANSASNGVTISSKTRIRWTQDLHEKFVECVNRLGGADKATPKAVLKMMDSDGLTIFHVKSHLQKYRIAKYMPDPIHNGKSEKRIHIENLQHQHLHLDMKSGIQIREALQQQLDAQKLLHEQLENQRKLQLRIEEQGRQLKKMFEEQQKATNELLNCQNIITKDDT* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0345 342 SUPERFAMILY Homeodomain-like 188 244 IPR009057 -
Ahy16g0345 342 Gene3D - 189 248 - -
Ahy16g0345 342 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 187 247 IPR017930 -
Ahy16g0345 342 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 190 245 IPR006447 GO:0003677
Ahy16g0345 342 Coils Coil 309 329 - -
Ahy16g0345 342 Pfam MYB-CC type transfactor, LHEQLE motif 279 326 IPR025756 -
Ahy16g0345 342 MobiDBLite consensus disorder prediction 154 183 - -
Ahy16g0345 342 Pfam Myb-like DNA-binding domain 194 243 IPR001005 -
Ahy16g0345 342 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 41 340 - -
Ahy16g0345 342 Coils Coil 282 302 - -
Ahy16g0345 342 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 41 340 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0345 Ahy-Chr16 6958677 6961146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0345 175 323 G2-like Transcription Factor Family AT4G28610 55.705 2.84e-48 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy16g0345 Myb_DNA-binding 6.40E-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0345 - - gmx:100527257 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0345 16 6958677 6961146 Ahy16g0345 16 6958677 6961146 ECH
Ahy16g0345 16 6958677 6961146 Ahy6g0986 6 12946946 12949643 hybridization