Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0328 ATGAGGATCCGCAAAAGCCATGCGTTTTTATCTTCCCCCCACTTTCCGCCCACTCCTCCGTCAGATCCCCACCGCTCACCAGGGCTGGTGCAACTCACCACCGCAAATCTCCACCACCGACAACGTGGCTCCGATCATGGTGCTCAACCGTCTGATCAACCTATCAACGGCTGGGATGATTCCTCCGGTGAGAGTGGGGCACACAGACAGCACATCAAGCAAGACCCTTCGGTGGAGGATGATTATGATTATGATGATGGAAGAAGAGAAGACAGTGGTGAAGACTCGGAGGACAAGAAAAGTAATCATTCCAGGAAAGGAAACATCTTTGGTTCTTCTCAAACACTGCCACCAGCACCACCGTTAAACCTTTATTCTTCGACTCCTCTTCAAGTATTGTATGCAGATGAGAGATGGTGTGAGGAAGAGAAAGCGATTCCTTTCAAGAAACGAAGAGGGAGCTTTGACAACATGGGAATGAGTGATGGTAAGAAGACGAAGGCGAGGATGAAGACGAAGATGAACAACAAGTGCAGTAATAACAACAAGAGTGAAGAGGAGAAGGTGAAAGGGAAGAAGAAGAAGAAGGGGAGGGGCAGTGCAGTAATGGAAGGCTCACGGTGCAGTCGTGTGAATGGAAGAGGTTGGAGGTGTTGCCAACAAACTCTTGTTGGTTACTCCCTCTGTGAGCATCACTTGGGCAAAGGAAGACTCAGAAGCATGACAAGTGTTCGAAACCGTTCTACAACAACAAAGGTGGTGGTGCAACAACAACAACAACATGCTCATGATCGTGGTAATAATAATAATAATCCTTCATCTTCTTCTTCTTCTGATAAGCTCAGCGTGAAGACGATAATGGGTGGTGGTAGTAGCAACAAGAGGAAGATGAAGCAGCTTGGAATGGTGAAAGCTCGATCCATAAACAGCTTACTGGGCCAAACAACTAACACACCCATTGCGCACACTTAG 972 0.4743 MRIRKSHAFLSSPHFPPTPPSDPHRSPGLVQLTTANLHHRQRGSDHGAQPSDQPINGWDDSSGESGAHRQHIKQDPSVEDDYDYDDGRREDSGEDSEDKKSNHSRKGNIFGSSQTLPPAPPLNLYSSTPLQVLYADERWCEEEKAIPFKKRRGSFDNMGMSDGKKTKARMKTKMNNKCSNNNKSEEEKVKGKKKKKGRGSAVMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRSTTTKVVVQQQQQHAHDRGNNNNNPSSSSSSDKLSVKTIMGGGSSNKRKMKQLGMVKARSINSLLGQTTNTPIAHT* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0328 323 PANTHER OS02G0773600 PROTEIN 24 318 - -
Ahy16g0328 323 MobiDBLite consensus disorder prediction 241 289 - -
Ahy16g0328 323 MobiDBLite consensus disorder prediction 240 296 - -
Ahy16g0328 323 MobiDBLite consensus disorder prediction 106 123 - -
Ahy16g0328 323 MobiDBLite consensus disorder prediction 157 202 - -
Ahy16g0328 323 ProSiteProfiles WRC domain profile. 202 246 IPR014977 -
Ahy16g0328 323 Pfam WRC 204 244 IPR014977 -
Ahy16g0328 323 PANTHER - 24 318 IPR031137 GO:0005634|GO:0006351|GO:0032502
Ahy16g0328 323 MobiDBLite consensus disorder prediction 1 123 - -
Ahy16g0328 323 MobiDBLite consensus disorder prediction 64 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0328 Ahy-Chr16 6821187 6823270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0328 197 283 GRF Transcription Factor Family AT3G52910 32.292 3.09e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0328 - - aip:107645407 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0328 16 6821187 6823270 Ahy16g0328 16 6821187 6823270 ECH
Ahy16g0328 16 6821187 6823270 Ahy6g1004 6 13174412 13176523 hybridization
Ahy16g0328 16 6821187 6823270 Ahy19g0994 19 15860076 15862980 PCT
Ahy19g0994 19 15860076 15862980 Ahy16g0328 16 6821187 6823270 PCT