Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0325 ATGGAGCTTGCTTTGAGCTTAGGGGAAGCACCTAAGTCCTTCAATTTGCTTGACAACACTTCCAAACTACCTAACAACAAGGATCCAGTGGGTTTCTGCATAGCACTTGGTGCTGCTGCTTCCTCCGCCGGAAAATCCTCCGAGGAAGAGAGAAGAGGATCCTCAGATCCGCCAGTTCAGCTCGACCTTCTCCCTTCAACGCCGGTTCTTCGCTCCCAACATCCATCTTCACACCTTCGAATTCCATGGCTCAACGATGCACTTGGTTTGGAGAGGGTGACATCGGAGGCACCGGCGGCGAGGGCGTTGGACGTGAACTCTTTCCCGGTGGCTCCTGCGGCGGGAGAAGACGGGGACGACGGCGCTGCACTGTCTTCGCCTAACAGCGCCGTATCGTCCTTTCAGATGGATTTCTGTCTGAGAAACGGTGGTAACGGCGGTGATGGTGCGGCGGCGATGATGAGGAGCAGGAGAGACGTGGAAGGTGGTGAGGGCAACGACAGAGGCACCAGCGACGACGACGAGAACGGATCCACCAGGAAGAAGCTCAGGCTCTCTAAGGAACAATCTGCGTTTCTTGAAGAGAGCTTCAAAGAACACACCACCCTTAATCCTAAGCAGAAACTGGCTCTTGCGAAACAGTTAAACCTTCGTCCCCGTCAAGTTGAAGTTTGGTTTCAGAACAGAAGAGCAAGGACCAAGTTGAAGCAAACGGAGGTGGATTGCGAGTACTTGAAGAGGTGCTGTGACACCTTAACGGAAGAGAATCGGAGGTTGCAGAAGGAGCTTCAAGAGCTGAGGGCATTAAAGACTTCTCAACCCTTCTACATGCAGCTTCCGGCCACCACTCTCACAATGTGTCCTTCTTGTGAAAGGGTCGCCACCAACACCGCCGCTAATAACAATGACGCTTCTCAGATTGCTTCCGCTTTGTCTCTTAGTAACAAGCCCAGAATCTTGCCATTTCCTAATACTCAGGCCCATCCTCCTCCGGCCCAAAAGGCCCATCAATGA 1014 0.5286 MELALSLGEAPKSFNLLDNTSKLPNNKDPVGFCIALGAAASSAGKSSEEERRGSSDPPVQLDLLPSTPVLRSQHPSSHLRIPWLNDALGLERVTSEAPAARALDVNSFPVAPAAGEDGDDGAALSSPNSAVSSFQMDFCLRNGGNGGDGAAAMMRSRRDVEGGEGNDRGTSDDDENGSTRKKLRLSKEQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCDTLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVATNTAANNNDASQIASALSLSNKPRILPFPNTQAHPPPAQKAHQ* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0325 337 MobiDBLite consensus disorder prediction 318 337 - -
Ahy16g0325 337 PANTHER - 2 306 - -
Ahy16g0325 337 Coils Coil 242 272 - -
Ahy16g0325 337 ProSitePatterns 'Homeobox' domain signature. 211 234 IPR017970 GO:0000981|GO:0006355
Ahy16g0325 337 MobiDBLite consensus disorder prediction 43 76 - -
Ahy16g0325 337 ProSiteProfiles 'Homeobox' domain profile. 176 236 IPR001356 GO:0003677
Ahy16g0325 337 MobiDBLite consensus disorder prediction 159 185 - -
Ahy16g0325 337 Pfam HD-ZIP protein N terminus 31 134 IPR006712 GO:0005634
Ahy16g0325 337 CDD homeodomain 180 237 IPR001356 GO:0003677
Ahy16g0325 337 Pfam Homeobox associated leucine zipper 236 270 IPR003106 GO:0006355|GO:0043565
Ahy16g0325 337 SMART halz 236 279 IPR003106 GO:0006355|GO:0043565
Ahy16g0325 337 Gene3D - 184 234 - -
Ahy16g0325 337 SMART HOX_1 178 240 IPR001356 GO:0003677
Ahy16g0325 337 SUPERFAMILY Homeodomain-like 166 237 IPR009057 -
Ahy16g0325 337 Pfam Homeodomain 180 234 IPR001356 GO:0003677
Ahy16g0325 337 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 2 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0325 Ahy-Chr16 6774164 6776034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0325 58 302 Homeobox Transcription Factor Family AT5G47370 53.012 1.17e-72 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Ahy16g0325 HD-ZIP_N 1.60E-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0325 K09338 - gmx:100776113 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0325 16 6774164 6776034 Ahy6g1007 6 13223963 13225791 hybridization