Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0310 ATGGACAAAGCTGAGAGAGAGACGCACGACTTCATGAACGTCGACTCTTTCTCTCAGCTTCCCTTCATCCGCCCTGCTCCGCCCCCTAAAGAAAAGGGCATCAGACTCTTCGGCATAGAATTTGGCGACACTCCGCCAATTTCTGCTGCCCAAGAGTCTGAGTCCGCTGACACAACCACTAACGAAAACAGCAACAACAACTTAGAGAATAATAACAACAACAACAACAACGGCGAGAGTAGCCGGAGGTTCGAATGCCACTACTGCTGTAGAAACTTTCCGACTTCTCAAGCCCTCGGCGGACACCAAAACGCACACAAGAGAGAGAGGCAACACGCGAAACGACAACACCTTCAGTCAGCCATGGTTCACGGTTCCCTCGCCGAAGGCCACCACCAAGTTTACGGATTCATGAACTACAGGTTCGGATCTTTCGGTTCTTCTCCAACAATGGCTGCTTATCCTACATGGAATAACAGTAGCCACAACAACACCGGCGTCGGAAGGTTCTACGGAACCTCGTCATCATATTCTTCTTCTTCTTCTTCTTCTCATCATCAACAGCCACCCATCAATGGTAACCCCTTGTCCGTGTGGCGAATCCCTAACGGTGGTGGTGGTGGTGGTAGTAACAACCCTATCTTGGGGCGCGAACGGGGGTTTCCTTTGCTTGCAGGGGAAGAAGTGAACGCAAGAATAGGAGCAACAACGAGGGTGGAATTAAGTCCCAATAATAATAATGGTTCACAAAACGGGTATGTTTATGACTCCAAAACAAGCGTTAGTGACCATGTCAGCTTGGATCTTCATCTGTAA 816 0.4914 MDKAERETHDFMNVDSFSQLPFIRPAPPPKEKGIRLFGIEFGDTPPISAAQESESADTTTNENSNNNLENNNNNNNNGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRQHLQSAMVHGSLAEGHHQVYGFMNYRFGSFGSSPTMAAYPTWNNSSHNNTGVGRFYGTSSSYSSSSSSSHHQQPPINGNPLSVWRIPNGGGGGGSNNPILGRERGFPLLAGEEVNARIGATTRVELSPNNNNGSQNGYVYDSKTSVSDHVSLDLHL* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0310 271 MobiDBLite consensus disorder prediction 48 79 - -
Ahy16g0310 271 MobiDBLite consensus disorder prediction 99 119 - -
Ahy16g0310 271 SUPERFAMILY beta-beta-alpha zinc fingers 81 112 IPR036236 -
Ahy16g0310 271 ProSiteProfiles Zinc finger C2H2 type domain profile. 84 111 IPR013087 -
Ahy16g0310 271 MobiDBLite consensus disorder prediction 40 79 - -
Ahy16g0310 271 Pfam C2H2-type zinc finger 83 108 - -
Ahy16g0310 271 PANTHER ZINC FINGER PROTEIN GIS 1 271 - -
Ahy16g0310 271 MobiDBLite consensus disorder prediction 173 194 - -
Ahy16g0310 271 MobiDBLite consensus disorder prediction 173 215 - -
Ahy16g0310 271 ProSitePatterns Zinc finger C2H2 type domain signature. 86 106 IPR013087 -
Ahy16g0310 271 PANTHER ZINC FINGER PROTEIN GIS 1 271 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0310 Ahy-Chr16 6492121 6493426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0310 1 271 C2H2 Transcription Factor Family AT2G41940 41.404 2.76e-45 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0310 - - jre:109011926 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0310 16 6492121 6493426 Ahy16g0310 16 6492121 6493426 ECH
Ahy16g0310 16 6492121 6493426 Ahy6g1019 6 13598614 13599988 hybridization