Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0297 ATGAGGTCGGAAGTGGAAGAGTCGGAGTACTATTCAGAGGAATTGGTCCGTGCCCCTGATCCAGTTGAAGTTCTCCATGTTGATGGTGAAGGGAGCAATGTAGGCGAGGAAGGGAGTGAGGGATTCGAAGGGGACGAAGGTTTTGAAGAAGAGTCAGAGATACATGATGAATTTGGGGATGGGTTCTATGACAACTGGGAAGAAAGAGCAATTAATGAAATTGCTGATCTAGGTTGTATGAATTTGAAGGAAATCACAGTGGAAGAGATTAAAAGTCTCCATTTTCCAGATCGGGAAGTCGCATTTTTATTCTACAACTTATATGCAAAAATGAATGGGTTTGCCGCTCGAAGGTATAGGTCTCGGCGTAATCTAAATAATGAGTTGATACAACAATCTTTTGTATGCTTCAGGCAGGGCTTTCGGAAGGCAAGAATTTGTGATGGAGTCGAAGTTGCTGATTGGAAACGGGAGCCGAAGCCAGAGACTAGGTGTGGCTGTGAGGCAGAAATGCGCGTCCATATCGACAAGGATACGGGCAGATGGATTGTAACATACTTCCAGGAAGTTCATAATCACAAGATGCTTGAGGACACACTTACTTTCATGCTTCCAGGACATAGAAGGATGAACTCGGCAGCAATTGATCAAATGAATATGATGTTAAAAGTCGGCATCAAGACCCCACAGATTTATGCATCGTTTGTGCAGACAGCAGGTGGGTGTGAAAATGTTCCGTTTTTGAAGAGAGACATGTACAACAGAATTGACAAGCAACGGAGGATTATTGGTGGGGATGCAAGTGCGTGCCTGAAGTTGTTGCAACGTATGGAAGTAGAAAATCCAGGAATGTTTGTTAGACACCTAGCGGACAAAGATGGTCGTTTGGTGCATTTATTTTGGTGTGATAACTGCAGTCAACTAGATTATGAAATATTTGGGGATGTATTAGCATTTGATGCGACATATCGCAAGAATAAGTACATGTGTCCGCTAGTGGTTTTCTCAGGGGTTAATCATCACAATCAAACAATCGTGTTTGCCGCTGCCCTTGTTGCGAATGAGACAGAGGAAACATATAAGTGGCTATTGCAGCAATTTTTGGAAGGCATGAAGGGCAAGGCACCCGAATGTGTCATCACTGATGGTCATGGAGCCATGAAGAAAGCAATTGAATCAGTTTTTCCAAATTCGTATCATCGTCTGTGTGCATGGCACTTACTCCGAAATGCAACCTCAAACATAAGCAATCCTGTGTTTACATCTGAATTCAAGAAATGCATGTTATTTGACTATGAAGTGGCAGAGTTCGAACAGCACTGGAATAATGTGGTTTCTGAGCTAGGCCTACAAGATAATCCCTGGGTGTGTGATCTATATGCTAGAAGACATATGTGGGCAACTGCACACATCCGTGGTAATTTCTTTGGGGGCTTCCGAACCACGTCAAGATGTGAGGGGCTTCACTCTATGCTCGGCAAGTTTGTGCATTCCCGGCACAACTTAAAAGACTTTGTTGAGCAATTCTTTCGATGTATTAGTCAAATGAGGTCCCGGGAAGCATTCTCTGACTTACAATCCACTGTTGGGGATATGGTACTACAAAGCCCTCTACGATCGCTTGAAAGGTCTGCGGCAAGTGTACTGACAAGAGAGATATTTCTTATTTTCCGACCAATGCTTTCACGGGCTTGCACGTTAAAGGTAAGGTCGTGTACATTCACAGCATGTTCAGATATCTACTCCCTATTCCGGTCTGGAGATTCTGCCCGAGAGTGGCGCGTTTCACATTATCGAAATGGGTCATTCTTCAAGTGTTCGTGCATGAGGATGGAGACCCTTGGGATTCCTTGTGACCACATTATAGCAGTATTTCATCACCTTGATATCACTGAAATGCCTGCGAGTGTAATATTGGAGAGGTGGTCAAAAGATGCCCGTTCGAGGGTAAGGGCTTTCATGGAAAAGGGACCGTTTTGCTGGGATTCAATGGTTACCTGCCGCAATTGGATGTTGAATGACCTATGCAGGGAGTTGTGTGTGCTTGCTTCTGCACAAGTGGATGATTTTGTGGACGTCACTGGTAAATTGAGAAATGAAATTTTGCACTTGAAAAGCAAGAGAGTTTCTCCAATTGGGGAAGGAACTGATCCTCTGGTGTCATCTACTCTTGAGGATTGTGTAAGGGATCCACAGGTTCTACGTCACCACAAGCGCCGTAAATTTGGTGTGGGTAGGCAGCCATCTAGCAAGGGTATAAAGAGATGTGGAATTTGCCGCGCGGTTGGCCATAACCGATTATCTTGTTCACAAAGGCATACACACGGGCAAGGACACACTGCTGTTGATAGTGGTACCCAACGGAGGGCTGTTTATGAAGAGGCTGATTATGGTGACTATGAAGATTCATGGGAAGAGTGCCACCTTTGGAGCGGTCACGATGCTAGCGAGAACCATGAAGACGAATCTTGCGAGGAAGACCATTACTTGGATGTATCTTTGTCGGAGCCATGA 2514 0.4467 MRSEVEESEYYSEELVRAPDPVEVLHVDGEGSNVGEEGSEGFEGDEGFEEESEIHDEFGDGFYDNWEERAINEIADLGCMNLKEITVEEIKSLHFPDREVAFLFYNLYAKMNGFAARRYRSRRNLNNELIQQSFVCFRQGFRKARICDGVEVADWKREPKPETRCGCEAEMRVHIDKDTGRWIVTYFQEVHNHKMLEDTLTFMLPGHRRMNSAAIDQMNMMLKVGIKTPQIYASFVQTAGGCENVPFLKRDMYNRIDKQRRIIGGDASACLKLLQRMEVENPGMFVRHLADKDGRLVHLFWCDNCSQLDYEIFGDVLAFDATYRKNKYMCPLVVFSGVNHHNQTIVFAAALVANETEETYKWLLQQFLEGMKGKAPECVITDGHGAMKKAIESVFPNSYHRLCAWHLLRNATSNISNPVFTSEFKKCMLFDYEVAEFEQHWNNVVSELGLQDNPWVCDLYARRHMWATAHIRGNFFGGFRTTSRCEGLHSMLGKFVHSRHNLKDFVEQFFRCISQMRSREAFSDLQSTVGDMVLQSPLRSLERSAASVLTREIFLIFRPMLSRACTLKVRSCTFTACSDIYSLFRSGDSAREWRVSHYRNGSFFKCSCMRMETLGIPCDHIIAVFHHLDITEMPASVILERWSKDARSRVRAFMEKGPFCWDSMVTCRNWMLNDLCRELCVLASAQVDDFVDVTGKLRNEILHLKSKRVSPIGEGTDPLVSSTLEDCVRDPQVLRHHKRRKFGVGRQPSSKGIKRCGICRAVGHNRLSCSQRHTHGQGHTAVDSGTQRRAVYEEADYGDYEDSWEECHLWSGHDASENHEDESCEEDHYLDVSLSEP* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0297 837 Pfam FAR1 DNA-binding domain 104 196 IPR004330 -
Ahy16g0297 837 Pfam MULE transposase domain 316 410 IPR018289 -
Ahy16g0297 837 SMART 26again6 604 631 IPR006564 GO:0008270
Ahy16g0297 837 PANTHER OS02G0262500 PROTEIN 91 721 - -
Ahy16g0297 837 MobiDBLite consensus disorder prediction 26 50 - -
Ahy16g0297 837 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 91 721 IPR031052 GO:0006355
Ahy16g0297 837 ProSiteProfiles Zinc finger SWIM-type profile. 593 629 IPR007527 GO:0008270
Ahy16g0297 837 MobiDBLite consensus disorder prediction 818 837 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0297 Ahy-Chr16 6352412 6355645 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy16g0297 MULE 1.20E-31 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0297 - - ahf:112758016 1684.46