Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0288 ATGAAGGACTTGTTAGTGGATTCCCCAGTTTGTGTTCTTGAGGATTTCCTAAGGACCTCAGAATCAGAATCAAGCACTTATTCTTCCAAAGAGCACACTTTGGATTCTGAGTCTCATCAAGATAAGCCTAAACATGTTTCTAAGTGGCAGGTGGAAGGTGGAATGCATCTGGTTCTTGAATTGTCTGAAAAAGGAAGCCTAGCTTCAGTTCTTTATGGGTCCAAGGAGAACCTTCCCTGGTCTATTAGGCAGAGAATTGCATTAGGAACAGCAGAGGGAATATTATATCTTCATGAAGGTTGTCAAAGAAGAATTATCCATAGAGATATAAAAGCTGCAAATATCTTACTCACTGATGACTTTGAGCCTCAGATTTGTGATTTTGGGCTTGCAAAATGGCTACCAGAGAATTGGACTCACCACAGTGTTACAAGATTTGAAGGGACATTTGGATACCTTGCTCCAGAATACTTACTCCATGGCATAGTAGACGAGAAAACAGATGTATTTGCCTTTGGTGTTGTGCTATTAGAATTAGTAACTGGCCGGAGAGCGCTTGATTACTCGCAACAAAGTCTTGTCCTATGGGCAAAACCTTTGCTGAAGAAGAATAAAATTAGGGAGTTGATTGATCCTTCACTAGGAGGTGATGACTTTGATTATAGACAGATTAATGTTATGCTCTTGGCAGCTTCTTTATGCATACAACAATCTTCAATTCGTCGTCCCTCTATGAGACAGATTGTGCAGCTTCTGAAAGGGAATCTTAGCTGCATCAAGTTTGCAAAGAAATCTCGAGTTCCATTCTTCACAAGAGTCTTTCAAGACGAGTTTCTTGACTCTGATTAG 849 0.4028 MKDLLVDSPVCVLEDFLRTSESESSTYSSKEHTLDSESHQDKPKHVSKWQVEGGMHLVLELSEKGSLASVLYGSKENLPWSIRQRIALGTAEGILYLHEGCQRRIIHRDIKAANILLTDDFEPQICDFGLAKWLPENWTHHSVTRFEGTFGYLAPEYLLHGIVDEKTDVFAFGVVLLELVTGRRALDYSQQSLVLWAKPLLKKNKIRELIDPSLGGDDFDYRQINVMLLAASLCIQQSSIRRPSMRQIVQLLKGNLSCIKFAKKSRVPFFTRVFQDEFLDSD* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0288 282 ProSiteProfiles Protein kinase domain profile. 1 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g0288 282 Pfam Protein kinase domain 50 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g0288 282 SMART serkin_6 4 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g0288 282 ProSitePatterns Serine/Threonine protein kinases active-site signature. 105 117 IPR008271 GO:0004672|GO:0006468
Ahy16g0288 282 SUPERFAMILY Protein kinase-like (PK-like) 49 252 IPR011009 -
Ahy16g0288 282 Gene3D Transferase(Phosphotransferase) domain 1 63 266 - -
Ahy16g0288 282 PANTHER OS08G0249100 PROTEIN 49 280 - -
Ahy16g0288 282 PANTHER PROTEIN KINASE FAMILY PROTEIN 49 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0288 Ahy-Chr16 6266527 6268338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0288 78 252 Trihelix Transcription Factor Family AT5G38560 48.370 4.86e-50 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Ahy16g0288 Pkinase 2.00E-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0288 - - gmx:100780587 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0288 16 6266527 6268338 Ahy16g0999 16 18050486 18057163 ECH
Ahy16g0288 16 6266527 6268338 Ahy16g0288 16 6266527 6268338 ECH
Ahy16g0288 16 6266527 6268338 Ahy12g2552 12 114742050 114748046 ECH
Ahy11g2492 11 140507164 140509957 Ahy16g0288 16 6266527 6268338 ECH
Ahy14g0360 14 4890919 4893804 Ahy16g0288 16 6266527 6268338 ECH
Ahy16g0288 16 6266527 6268338 Ahy6g1036 6 13762641 13765221 hybridization
Ahy16g0288 16 6266527 6268338 Ahy12g2552 12 114742050 114748046 PCT
Ahy16g0288 16 6266527 6268338 Ahy2g2215 2 98044195 98048532 PCT
Ahy12g2552 12 114742050 114748046 Ahy16g0288 16 6266527 6268338 PCT
Ahy2g2215 2 98044195 98048532 Ahy16g0288 16 6266527 6268338 PCT