Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0262 ATGCCAAGCTGTAGCAGGGTTCAAAGCATGCTGCAGGCTGCGGTTCAATCACTTCACTGGACTTACACCATCTTTTGGCAACTCTCTCCACAACAAAGAGTTCTGAGGTGGAGTGATGGATTCTACAATGGAGAAATTAAGGTTAGGAGGATAGTTGAAGCAATAGAGGCTAACAAGAGTAGTAGTAATAATGAGGAGGCGTCTCTCCAGAGAAGCAACCAGCTTAGAGACCTCTATGACTTACTATTGTCTGATCGCCATGGAGACCACGTCTTCGCTGTTGATCCTCCGACAACTCCGCTTCCTTGCACCGCCTTGTCGCCGGAGGATCTTAGCGAATCCGGATGGTACTATTTGATGTGTGTCTCCTTCTCCTTTGCTCCTGGTGTAGGATGCAGGTTGAGAGGCTCCTCGCTAGGCGTCTGGATCTTTATTTGGAGCGGAGTAGTCCCTGGGTTATTTTGGGTTTTATGA 474 0.4831 MPSCSRVQSMLQAAVQSLHWTYTIFWQLSPQQRVLRWSDGFYNGEIKVRRIVEAIEANKSSSNNEEASLQRSNQLRDLYDLLLSDRHGDHVFAVDPPTTPLPCTALSPEDLSESGWYYLMCVSFSFAPGVGCRLRGSSLGVWIFIWSGVVPGLFWVL* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0262 157 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 8 135 IPR025610 -
Ahy16g0262 157 PANTHER TRANSCRIPTION FACTOR TT8 6 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0262 Ahy-Chr16 5909830 5918898 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0262 7 131 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 50.400 3.17e-38 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0262 - - pvu:PHAVU_007G171300g 137.887