Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0258 ATGAGTCAAGAGTTGGGTGATGAGTTAGACGGTGAGGAGATATTTGAAGAATTGACATATTATGATTATGATGATGCATATGGATTGGATTCAATTGAGGATTTATTGAAACTTGACTTTTTAAGCATTGGTGAGGTTGAAGTTGACAAGTTTCACTTTGGAACCCTACCCATTGCTTTTGAATTTTACAACAAATTTGCAAAGAGCCAAGGTTTCAGTGCAAGAAAAGACAAAAATTGGAAGAACTCAAGTGACGAGACCTACATGCAGAGGTTCGTGTGTTTTCGGCAAGGATATCGATTAGAGAAGTGGTACACTTTGCCAAATAGAAAAAGGGAACCAAAGACTGAGACAAGAACCGGGTGCGAAGCTCAATTCCAAGTCAAGTTTGTAGGGGTAACTGGAAGATGGCATGTGACCCAATTTTCAAATGTTCATAATCACGAACTATTGGAAGGCCGGTTGAGCAGGTTATTGCCAGGTCATCGGAGTATGTCCAAAGCCGAAATTCCACTCATGAACAATATGCGCAAGTCGAGGATTAGCACATCCCAGGTTTATGCTTTGCTAGCAAGTCAAAGTGGCTATTTTGACAAGTTGAACTATGGCCCTAGAGACATGTACAATCAAATAGCTAAGGCGAGGTGTGATATTCTAGAGGATGTGGGTAGAGCATTAAATTATTTGGAGGAGATGGCTGTGAAGGATAAACCTTTATACCGAAGAGCTTCATGCGACGGATGGAAGGTTAGTAAATCTCTTTTGGTGTGTGATGGTTTATGTAGAGAGGACTATGAATTGTTTGGAGATGTTGTTGCGTTTGATGCTACATACAACAAGAATAAATATAAGTGTCCTTTTGTTGTGTTCATAGGTGTCAACCATCACAACCAAACTGTTGTCTTTGCTGCATGCATTGTAACAGATGAGACGGATGAGACTTATATATGGGTGTTGCAACAGTTTTTGGAGGCAATGAAGGGTAGAGCCTGGTGCACGAAATTGTGA 1008 0.4048 MSQELGDELDGEEIFEELTYYDYDDAYGLDSIEDLLKLDFLSIGEVEVDKFHFGTLPIAFEFYNKFAKSQGFSARKDKNWKNSSDETYMQRFVCFRQGYRLEKWYTLPNRKREPKTETRTGCEAQFQVKFVGVTGRWHVTQFSNVHNHELLEGRLSRLLPGHRSMSKAEIPLMNNMRKSRISTSQVYALLASQSGYFDKLNYGPRDMYNQIAKARCDILEDVGRALNYLEEMAVKDKPLYRRASCDGWKVSKSLLVCDGLCREDYELFGDVVAFDATYNKNKYKCPFVVFIGVNHHNQTVVFAACIVTDETDETYIWVLQQFLEAMKGRAWCTKL* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0258 335 PANTHER OS02G0262500 PROTEIN 52 327 - -
Ahy16g0258 335 Pfam FAR1 DNA-binding domain 61 151 IPR004330 -
Ahy16g0258 335 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 52 327 IPR031052 GO:0006355
Ahy16g0258 335 Pfam MULE transposase domain 271 328 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0258 Ahy-Chr16 5646883 5647890 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy16g0258 FAR1 5.10E-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0258 - - ahf:112756532 696.427