Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0240 ATGACCATATCAATGGTGTTGTGCAATCCATCAACACAACCAATCATAAATGTTCCTTGCAATGGTCCAAAACTGATCAACGCTAAGCAGAAAGAGAAGGTGGTTTTGGTCATGGGAGCAACCGGGACCGGAAAATCACGGCTCTCCATCGACCTTGGAACATGTTTTCCATCGGAAATCATCAACTCCGACAAAATTCAAGCCTATGAAGGACTAGAAATAGCCACAAACAAGGTCACAAAGGAAGAACAACGAGGCGTGCCACATCATTTGTTAGGGATACACAATCCCTACTCTGAGTTCACGGCCAATGATTTCTGCGACATGGCCTCGTTGGCCATGGAATCAATCATTGGCCGCGAACAACTCCCGATCATAGTCGGGGGGTCGAATTCCTATGTGGAAGCATTAGTGGAAAGATTTGGATCAAGGTATGATTGGTTTTTTCTTTGGTTGGATGTATCAATGCCAGTTCTTCATTCCTATGTATCAAGAAGAGTGGATGAGATGGTTGAGAAGGGAATGGTGAATGAATTAAGACCCTTTTTCAGTCCCAACGGGGATTACACAAAAGGGATAAGAAAGGCAATTGGGGTGCCGGAATTCGACATGTTCTTTCGAAGTGAAGCGACAACATGGGATGAGAGAAGGAAGCAGAGGTTGTTTGATGAGGCGATCAGCGGAGTGAAGAAGAACACGTGCACATTGGCGTGCAAGCAGTTTGAGAGGATTGAGAGGCTTAGGAATGTGAAGAGATGGAACATGCAGCGTGTGTGTGCCACAAGAGTGTTCGAAATGCATGGAAATGGTGATGATGATGAAGCAGATGAAGCGTGGAGGAAGATTGTGGCAGAGCCAAGTGCGAGATTAGTGGCACAGTTTCTATACAATGAAGCCATTAATAATAATAATAATAATTATTCTGGGATTAGTTCGCGTGCCAGGTTCTTCTAA 954 0.4455 MTISMVLCNPSTQPIINVPCNGPKLINAKQKEKVVLVMGATGTGKSRLSIDLGTCFPSEIINSDKIQAYEGLEIATNKVTKEEQRGVPHHLLGIHNPYSEFTANDFCDMASLAMESIIGREQLPIIVGGSNSYVEALVERFGSRYDWFFLWLDVSMPVLHSYVSRRVDEMVEKGMVNELRPFFSPNGDYTKGIRKAIGVPEFDMFFRSEATTWDERRKQRLFDEAISGVKKNTCTLACKQFERIERLRNVKRWNMQRVCATRVFEMHGNGDDDEADEAWRKIVAEPSARLVAQFLYNEAINNNNNNYSGISSRARFF* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0240 317 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 27 301 - -
Ahy16g0240 317 Pfam IPP transferase 144 242 - -
Ahy16g0240 317 Pfam IPP transferase 67 141 - -
Ahy16g0240 317 Gene3D - 31 295 IPR027417 -
Ahy16g0240 317 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 146 IPR027417 -
Ahy16g0240 317 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 27 301 IPR039657 -
Ahy16g0240 317 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 156 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0240 Ahy-Chr16 2609104 2610223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0240 142 299 C2H2 Transcription Factor Family AT2G27760 29.348 5.28e-18 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0240 K10760 - gmx:100777757 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0240 16 2609104 2610223 Ahy16g0240 16 2609104 2610223 ECH
Ahy16g0240 16 2609104 2610223 Ahy6g1069 6 14432694 14433708 hybridization