Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0239 ATGGAATCGAAAATGTCCTTTACTTCTGGAGGAACCAGTTGCCATGTTACTGGTTCAGCTGCTGAGGATGATTCAAACATGCAAGATGCTGTTGCAACTGAAGAAGGGAGTGGGAGCCAATGGAGTTTCCTCCCAAAACCATCTCATCATAACTATGTTCAGTATCTGACTGAATCCTCAAACTATCTGCCTAAGACTGAGGATATGATTGGGAGCAATTATGCAGCTCTTGGATTTGGAAACGATGGCAATGGAACAAACATGAACTTCTTTTGTAATGATCCTGGAAAAGCTTATGCCTTTAAAACTGAAGTTCATTCTTCCAATGAAGTTGACATTGGCAAGCAAGTGGGGTATTGGAGACCTGCTGAGAGTGAAGTCCAGCAGGAAGCAATGCAATTTGAAAGTACTCAACATCATCACCCTCTCTATCCTGAGAGTCCTGCTTCATGGACACCAGAAGCAATTGGAGATAATCCTAATGTTTCACGGCTTGATCCATCGGTATTGGCTGGCACACCTAGTTTCCTTCCTAAACCAGCAAGACAGAAAGCCAGTGACCGAGTAAGTCAACAACGCAGGCAACGAATTGCCGATAATCTGAAAGCACTACACGACTTGCTTCCAAATCAAGCAGAGGGTAGTCAAGCTTATATACTGGACGACATTATCGACCATGTTAAATATTTGCAGCTTCAGTTAAAGGAACTAAGTGGAAGTAGACTACAAGCTGAATCAACTGCTATACCACTGGTTTTCCATGAGCAGGGTTATGGGCATTATATTGACCAGCAGAAGCTGAATGAACCACTTGAAGAGATGATGGGGAAACTTCTTGAAGAGAATCCTGCATCTGCCAGTCAGCTTCTGGAGAACAATGGTCTTGTCCTGCTGCCTATGGAGTTGGTTCAAGACTTGCACCAATCCATGCAAATCTTCGGCAACGGCAATGCACTTGTCTGA 963 0.4382 MESKMSFTSGGTSCHVTGSAAEDDSNMQDAVATEEGSGSQWSFLPKPSHHNYVQYLTESSNYLPKTEDMIGSNYAALGFGNDGNGTNMNFFCNDPGKAYAFKTEVHSSNEVDIGKQVGYWRPAESEVQQEAMQFESTQHHHPLYPESPASWTPEAIGDNPNVSRLDPSVLAGTPSFLPKPARQKASDRVSQQRRQRIADNLKALHDLLPNQAEGSQAYILDDIIDHVKYLQLQLKELSGSRLQAESTAIPLVFHEQGYGHYIDQQKLNEPLEEMMGKLLEENPASASQLLENNGLVLLPMELVQDLHQSMQIFGNGNALV* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0239 320 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 191 245 IPR036638 GO:0046983
Ahy16g0239 320 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 21 303 - -
Ahy16g0239 320 PANTHER TRANSCRIPTION FACTOR BHLH66-LIKE ISOFORM X1 21 303 - -
Ahy16g0239 320 SMART finulus 184 236 IPR011598 GO:0046983
Ahy16g0239 320 MobiDBLite consensus disorder prediction 1 43 - -
Ahy16g0239 320 Pfam Helix-loop-helix DNA-binding domain 191 231 IPR011598 GO:0046983
Ahy16g0239 320 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 181 230 IPR011598 GO:0046983
Ahy16g0239 320 CDD bHLH_AtbHLH_like 188 238 IPR045239 -
Ahy16g0239 320 Gene3D - 179 249 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0239 Ahy-Chr16 2602253 2605675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0239 193 306 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 39.130 1.65e-18 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0239 - - cam:101507064 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0239 16 2602253 2605675 Ahy16g0239 16 2602253 2605675 ECH