Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0225 ATGCCAAGCTGTAGCAGGGTTCAAAGCATGCTGCAGGCTGCGGTTCAATCACTTCACTGGACTTACACCATCTTTTGGCAACTCTCTCCACAACAAAGAGTTCTAAGGTGGAGTGATGGATTCTACAATGGAGAAATTAAGATTAGGAGGACAGTTGAAGCAATAGAGGCTAACAAGAGTAGTAGTAATAATGAGGAGGCGTCTCTCCAGAGAAGCAACCAGCTTAGAGACCTCTATGACTTACTATTGTCTGATCGCCATGGAGACCACGTCTTCGCTGTTGATCCTCCGGCAACTCCGCGTCCTTCCACCGCTTTGTCGCCGGAGGATCTTAGCGAATCCGAATGGTACTATTTGATGTGTGTCTCCTTCTCCTTTGCTCCTGGTGTAGGGTTGCCGGGAAAGGCATATGCGAGGAGGCAGCATGTTTGGCTCCAAGGTGCAAACGAAACGGACACCAAGACATTTTCAAGAGCAATTCTTGCCAAGAGTGCTCATGTGAAGACAGTGGTGTGCATTCCAATGTTGGATGGCGTCGTTGAAGTCGGCACCATTGATAAGGTAAAAGAAGACATCAACGTAATCAAACATGTAAAGAGCTTCTTCATAGGAGATCACCACCGTCCCCAACCAAAGCATGCCCTATCTGAAAACTCTGCCTCCAATCCCATTACAGAAGAAGCTCAATTATTATTGGATTCAGAAACAGCAACCCTCCCACAAAGCAAGCTTAAGGAGCCGGTCGTGGCAGAGGACGGTAGCCGAGCCGGATCGCCGGATGATGGCTCCAATCGGCTGAACTCAGCCGGGTTGGAGCTGCTTCCACCAGAATCAGCAGCTTCACTAGAACTACTACATGGTGATGAGTATGATAATAACTCAGAGGCCGAGACATCTCACCTATGTACGGAGCAAGAAGGCCACACACACTACTCTAAAACGGTGTCCACCATCCTTGAAGGCAGCTCCGGCCATCGGCCGGATGCTGTTTGCGGCTTATTGTCCTTCCAATCAGCTTTTGCCACGTGGAGCAGCCGTGCTTATAACTGCCACCAGGTGACGGTGGTTGAAAACCCCCAACGGCTCCTCAAGAACATATTGTTTAGGGTTCCATACTTGCATCGCAAGCAAAACCGCCACAATTCAGCAGAAACCCTAGAACAATTGGAAAGAACGATAATGCCTTCTCCACAAGATGACCTAATCAGCAGCCACGTGGCAGCGGAGCGGCGGCGTCGCGAAAAGCTGAACGAGAAGTTCATCACGTTAAGGTCGTTGGTACCATATGTGACGAAAATGGACAAGGCTTCTATATTAGGAGACACAATTGAGTACGTGAAACAGTTGCACGAGAAGGTGAAGAAGCTGGAGGAGGAAGATCAACGGCGGAGAAGTGGAAAGAAGAGGAAGGAGAGGGCGGTGGAGGTTTCGGTGATAGAGGGTGAGATTTTGTTGGAGGTGGAGTGTATGAATAGGGAAGGGTTGTTGCTTGATTTGATGAGAACATTGAAGGAGGTGGGAATAGAGGTGAGAGGGGTAAAATCGTCATTTAAGGGTGATGATGAAAGGGTGTTTGTGGTGGAGTTAAGAGGCAAGGTGAAAGAAAATGGAAAAAGGAATAATAATAATAAGAAGAATAAGAAGATTAGCATCGTGGAAGTGAAGAAGGTCCTTCATAACATTATAAACCCTCATCATCATCCACTATAA 1710 0.4766 MPSCSRVQSMLQAAVQSLHWTYTIFWQLSPQQRVLRWSDGFYNGEIKIRRTVEAIEANKSSSNNEEASLQRSNQLRDLYDLLLSDRHGDHVFAVDPPATPRPSTALSPEDLSESEWYYLMCVSFSFAPGVGLPGKAYARRQHVWLQGANETDTKTFSRAILAKSAHVKTVVCIPMLDGVVEVGTIDKVKEDINVIKHVKSFFIGDHHRPQPKHALSENSASNPITEEAQLLLDSETATLPQSKLKEPVVAEDGSRAGSPDDGSNRLNSAGLELLPPESAASLELLHGDEYDNNSEAETSHLCTEQEGHTHYSKTVSTILEGSSGHRPDAVCGLLSFQSAFATWSSRAYNCHQVTVVENPQRLLKNILFRVPYLHRKQNRHNSAETLEQLERTIMPSPQDDLISSHVAAERRRREKLNEKFITLRSLVPYVTKMDKASILGDTIEYVKQLHEKVKKLEEEDQRRRSGKKRKERAVEVSVIEGEILLEVECMNREGLLLDLMRTLKEVGIEVRGVKSSFKGDDERVFVVELRGKVKENGKRNNNNKKNKKISIVEVKKVLHNIINPHHHPL* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0225 569 Coils Coil 439 459 - -
Ahy16g0225 569 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 400 449 IPR011598 GO:0046983
Ahy16g0225 569 PANTHER TRANSCRIPTION FACTOR TT8 7 563 - -
Ahy16g0225 569 PANTHER TRANSCRIPTION FACTOR TT8 7 563 - -
Ahy16g0225 569 MobiDBLite consensus disorder prediction 241 270 - -
Ahy16g0225 569 Pfam Helix-loop-helix DNA-binding domain 404 450 IPR011598 GO:0046983
Ahy16g0225 569 SMART finulus 406 455 IPR011598 GO:0046983
Ahy16g0225 569 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 8 202 IPR025610 -
Ahy16g0225 569 Gene3D - 402 473 IPR036638 GO:0046983
Ahy16g0225 569 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 399 462 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0225 Ahy-Chr16 2468291 2476422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0225 7 562 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 44.640 9.49e-145 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy16g0225 bHLH-MYC_N 2.60E-48 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0225 - - aprc:113862120 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0225 16 2468291 2476422 Ahy16g0225 16 2468291 2476422 ECH