Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0219 ATGGCTCCCAAACGCAAAAGTTTGAAGCGCAAACTCGAACATGATTCGGTTGCACTTGGATCAGATCGCACCAAGTCTCCACAGCCGCTTCAAAATTCTCCTCCTCCTTCTTCTCGTGATTTCTCCGCTGTCATTCTTTCACATGTAGATCTCCTCAATTCCCCTTCATCCACATATGTGACTGACCGTGCTGCTCTTTTTAGATCGCTCCATGCTCTCTCCGATTTGGCCCAGAACGAGGAAATGGTTGATGATATCGTCAAGTGTGGTGTTGTACCCGCTGTGGTGAAGCATTTGGAGGTGCCGATTGACGGTGATTGTGTTTGTGGACCGTATGGTTATGAGGTAGAGAAAAAGTGTGCAATAATTCTTGGCCTTCTTGCTAATAAGCCAGAACATCAACACCTGATTGTTGATGCTGGAGCCTTGCCGTATATTGTGGACTTGTTAAAGAGGCACAAAACTAGTAGCATTATTTCTCCTGGTCTCGTTGGTCTTCTTAGGAGAGTAGCTGATGCAATAACTAATCTTGCACATGAAAATACCACCATAAAGAACCTTGTTAGGATGGAAGGTGGTATCCCTCCTCTTGTTGAATTGCTTGAATTCAATGACATAAATGTACAGAAGGCGGCTGCTGGCGCTCTGCGAACTCTTGCCTTCAAGAATGATGAGAATAAAAATCAGATTGTTGAATGCAAAGCATTACCAACTCTTGTGCTAATGCTCCGATCAGAGGATCCTACTGTACATTATGAGGCGGTTGGTGTGATAGGAAACCTTGTACACTCTTCGCCCAATATTAAGAAAGAAGTTATTCAAGCTGGGGCATTACAACCTGTCATTGGATTACTTAGTTCTAGCTGTTTGGAGAGTCAAAGAGAAGCGGCTCTTTTACTTGGTCAATTTGCTTCAACGGATACAGATTGCAAGGTTCATATTGCTCAAAGAGGGGCAATTCAGCCATTAGTTGGCATGCTTAAGTCATCAGATTCACAGCTTAAGGAAATGTCAGCTTTTGCTCTTGGGAGGTTGGCGCAGGATTCACACAATCAAGCTGGTATTGCTTATCATGGAGGTATTGAGCCTCTAATTGATCTTCTTAGCTCAAAGAATGCGTTCATCCAGCACAATGCAGCTTTTGCTCTATATGGCCTGGTGGATAATGAGGACATTATTGCAGACGTTATTAAGGCTGGTGGTTTTCACAAACTTCAGGATGGAAGTTTCAAAGCTCAACCAACTAGAGAGTGCGTAACAAAAACCTTAACAAGATTTGAGGAGAAGATCCAGGGGCAAGTATTGAAACACTTGTTATATCTTATGCGCTTTGCGGAAAAGGGTGTTCAACGGCGTGTTGCTCTTGCTCTTGCTCATTTATGTCCTATTGATGATTGTAGAACTGTCTTCATTGACTACAATGGATTAGAATTGCTGTTGGAGCTTCTTGGATCTACAAACCTTAAACAGACAGGTGTTGCTTCGCTGGCACTTCACAAGTTGGCTAGCAGAGCCATTTCTGTCCCTCTTGGTGATGTTGCACCTTCATCGCCAACTCCCCAGGAGTTCTTAGGCAAGCACTGTGTTAACAATCCAAAGCTCTCTGATGTCACATTCTTGGTTGAAGACAAAAGATTCTATGCTCATCGAGTTTGCTTAGTCAAGTCGGATATATTTCGAGCAATGTTTGATGGTGGTTACAGGGAAAGGGAAGCCAAAGATATAGAGATTCCAAACATCAAATGGGATGTATTTGTATTGATGATGAGATATATATACACTGGAACAGCAGATGTTAGTCTGGATATCGCTCAGGATCTTCTCAAAGCTGCTGATCAGTATCTTCTTGAGGGTCTTAAGCGTCTCTGCGAAAATACCATTTCGCAGGATATTACTGCAGAAAATGTTGCACTAATGTACCAGATGTCAGATACTTTTAATGCAACTTCACTAAAACATGCATGCATAATGTTTGTGTTGGACCAATTTGATAAGCTGAGTTCCAAACCATGGTATGGCTACCTGGTTTGCAGCATTGTTCCAGACATACGCAAATTCTTCTCAACTTTACTCGGGAAGTCTAGTTCTGCTGATTCATGA 2100 0.4257 MAPKRKSLKRKLEHDSVALGSDRTKSPQPLQNSPPPSSRDFSAVILSHVDLLNSPSSTYVTDRAALFRSLHALSDLAQNEEMVDDIVKCGVVPAVVKHLEVPIDGDCVCGPYGYEVEKKCAIILGLLANKPEHQHLIVDAGALPYIVDLLKRHKTSSIISPGLVGLLRRVADAITNLAHENTTIKNLVRMEGGIPPLVELLEFNDINVQKAAAGALRTLAFKNDENKNQIVECKALPTLVLMLRSEDPTVHYEAVGVIGNLVHSSPNIKKEVIQAGALQPVIGLLSSSCLESQREAALLLGQFASTDTDCKVHIAQRGAIQPLVGMLKSSDSQLKEMSAFALGRLAQDSHNQAGIAYHGGIEPLIDLLSSKNAFIQHNAAFALYGLVDNEDIIADVIKAGGFHKLQDGSFKAQPTRECVTKTLTRFEEKIQGQVLKHLLYLMRFAEKGVQRRVALALAHLCPIDDCRTVFIDYNGLELLLELLGSTNLKQTGVASLALHKLASRAISVPLGDVAPSSPTPQEFLGKHCVNNPKLSDVTFLVEDKRFYAHRVCLVKSDIFRAMFDGGYREREAKDIEIPNIKWDVFVLMMRYIYTGTADVSLDIAQDLLKAADQYLLEGLKRLCENTISQDITAENVALMYQMSDTFNATSLKHACIMFVLDQFDKLSSKPWYGYLVCSIVPDIRKFFSTLLGKSSSADS* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0219 699 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 359 401 IPR000225 GO:0005515
Ahy16g0219 699 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 PROTEIN 4 698 - -
Ahy16g0219 699 ProSiteProfiles BTB domain profile. 535 601 IPR000210 GO:0005515
Ahy16g0219 699 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 318 360 IPR000225 GO:0005515
Ahy16g0219 699 MobiDBLite consensus disorder prediction 1 20 - -
Ahy16g0219 699 SUPERFAMILY ARM repeat 169 502 IPR016024 -
Ahy16g0219 699 Pfam Armadillo/beta-catenin-like repeat 266 301 IPR000225 GO:0005515
Ahy16g0219 699 Pfam Armadillo/beta-catenin-like repeat 223 262 IPR000225 GO:0005515
Ahy16g0219 699 Pfam Armadillo/beta-catenin-like repeat 187 220 IPR000225 GO:0005515
Ahy16g0219 699 Gene3D - 42 407 IPR011989 -
Ahy16g0219 699 MobiDBLite consensus disorder prediction 1 38 - -
Ahy16g0219 699 Gene3D - 412 511 IPR011989 -
Ahy16g0219 699 SMART arm_5 79 129 IPR000225 GO:0005515
Ahy16g0219 699 SMART arm_5 307 347 IPR000225 GO:0005515
Ahy16g0219 699 SMART arm_5 223 263 IPR000225 GO:0005515
Ahy16g0219 699 SMART arm_5 130 179 IPR000225 GO:0005515
Ahy16g0219 699 SMART arm_5 463 503 IPR000225 GO:0005515
Ahy16g0219 699 SMART arm_5 265 305 IPR000225 GO:0005515
Ahy16g0219 699 SMART arm_5 348 388 IPR000225 GO:0005515
Ahy16g0219 699 SMART arm_5 181 221 IPR000225 GO:0005515
Ahy16g0219 699 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 4 698 IPR044282 -
Ahy16g0219 699 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 192 227 IPR000225 GO:0005515
Ahy16g0219 699 Gene3D Potassium Channel Kv1.1; Chain A 515 660 IPR011333 -
Ahy16g0219 699 SUPERFAMILY ARM repeat 66 153 IPR016024 -
Ahy16g0219 699 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 234 276 IPR000225 GO:0005515
Ahy16g0219 699 SUPERFAMILY POZ domain 527 630 IPR011333 -
Ahy16g0219 699 SMART BTB_4 535 631 IPR000210 GO:0005515
Ahy16g0219 699 Pfam BTB/POZ domain 530 629 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0219 Ahy-Chr16 2394141 2399247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0219 285 496 U-box Gene Family AT2G23140 31.081 1.73e-15 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Ahy16g0219 BTB 1.90E-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0219 - - sind:105165291 889.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0219 16 2394141 2399247 Ahy16g0219 16 2394141 2399247 ECH
Ahy16g0219 16 2394141 2399247 Ahy6g1101 6 15889396 15894342 hybridization