Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0182 ATGAACTATCTGTATCCGGTGAAGGAAGAGTATCTGGAGGAAGCATCGTCGTCGTCGTACTTTGTGGCTGGAAATGACGAGACGAGGATGGTTCCTCCGCCGCAGCCAATGGAGGGGCTCCACGAAGCGGGGCCACCACCATTCCTGACGAAGACGTTCGACGCGGTGGACGATCCGGCCACAGACCACGTAGTGTCGTGGAGCCGAAGCGGAGCAAGCTTCGTGGTTTGGGATCCGCACGCCTTCTCCAGAGGCCTTCTTCCAAGATACTTCAAGCATAACAACTTCTCCAGCTTCGTAAGGCAGCTCAACACTTACGGTTTTAGAAAGATTGATCCAGATAAATGGGAATTTGCGAATGAAGGGTTTGTGAGAGGGCACAGGCACCTGTTGACAAGTATAAGGAGAAGGAAGGCGCCTCCGCCACCAATTCAAACGCAGACTTCGCAGTCGCAGCAGGGTCACTGCCTTGAAGTAGGGCGGTTCGGATTGGATGAAGAGATCGACCGGTTGAGGCGTGACAAGCAGGTTTTGATGTTGGAGCTTGTGAGGCTAAGACAGCAGCAACAAACCACAAGATCGTATCTTCAGGCAATGGAGCAGAGGCTGCAAGGTACTGAGATCAAGCAGCAGCAGATGATGGCTTTCTTGGCCAAAGCAATGAAGAACCCCGTGTTTATACAGCAACTCATACAGCACAAGGAGAAGAGGAAGGAGCTTGAGGATGCCATGACCAAGAAGAGGAGGAGGCCCATTGAGCAAGGGCCTAGTTGCAGCGCCACTACTGTTAAGGTTGAGAATCCACCAGAGTTTGCTGGTTATGCTGGTGGCTTTGGAGCTTCTGAGCTTCAAATTCTGGCTATGGAGATGCAAGGATATGGTAGAGGGAGGCGAGAGAGTACTGAACATGAGCATGAGCAAGAGCAAGAGCAAGAGAGGCTTGACAAGGAGCTTGATGATGAAGGCTTCTGGGAAGAGCTGTTCAGTGAGAATTTTGAGGGTGATTTGGACATTTCACAAGATGAAGAAGAGGATGTTAATGTGTTGGCCAATCGGCTGGGTTACTTGGGTTCAAGTCCTAAGTGA 1086 0.5101 MNYLYPVKEEYLEEASSSSYFVAGNDETRMVPPPQPMEGLHEAGPPPFLTKTFDAVDDPATDHVVSWSRSGASFVVWDPHAFSRGLLPRYFKHNNFSSFVRQLNTYGFRKIDPDKWEFANEGFVRGHRHLLTSIRRRKAPPPPIQTQTSQSQQGHCLEVGRFGLDEEIDRLRRDKQVLMLELVRLRQQQQTTRSYLQAMEQRLQGTEIKQQQMMAFLAKAMKNPVFIQQLIQHKEKRKELEDAMTKKRRRPIEQGPSCSATTVKVENPPEFAGYAGGFGASELQILAMEMQGYGRGRRESTEHEHEQEQEQERLDKELDDEGFWEELFSENFEGDLDISQDEEEDVNVLANRLGYLGSSPK* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0182 361 MobiDBLite consensus disorder prediction 293 320 - -
Ahy16g0182 361 ProSitePatterns HSF-type DNA-binding domain signature. 87 111 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy16g0182 361 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 15 347 - -
Ahy16g0182 361 SMART hsfneu3 44 137 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy16g0182 361 Coils Coil 230 250 - -
Ahy16g0182 361 Pfam HSF-type DNA-binding 48 137 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy16g0182 361 Coils Coil 168 188 - -
Ahy16g0182 361 SUPERFAMILY "Winged helix" DNA-binding domain 44 137 IPR036390 -
Ahy16g0182 361 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 15 347 IPR027725 -
Ahy16g0182 361 MobiDBLite consensus disorder prediction 295 320 - -
Ahy16g0182 361 Gene3D - 40 138 IPR036388 -
Ahy16g0182 361 PRINTS Heat shock factor (HSF) domain signature 99 111 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy16g0182 361 PRINTS Heat shock factor (HSF) domain signature 86 98 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy16g0182 361 PRINTS Heat shock factor (HSF) domain signature 48 71 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0182 Ahy-Chr16 1915822 1918075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0182 22 359 HSF AT3G22830 53.209 3.32e-125 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Ahy16g0182 HSF_DNA-bind 2.20E-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0182 K09419 - gmx:100794264 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0182 16 1915822 1918075 Ahy6g1142 6 16709009 16715365 hybridization