Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0179 CAAGAACTTTCACACTGTAGCTTACCTTTTCCCACATCTGAAGGTTGGTATGAAGGTGGAAGCATATTCGTGGCGGTGTTGTTGGTGGTTGTTGTAAGCTCAGTCAGCAACTTGAGGCAGGAGAGGCAGTTTCACAAGCTGTCCAAGATTAGCAGTGACATCAAGGTCGATGTTGTGAGGAATGGAAGGCCGCAACAGATTTCGATTTTCGACGTTCTTGTGGGAGATATCGTTTCACTCAAGATTGGGGATCAAGTTCCCGCTGATGGATTGTTCATATCAGGTCATTCCCTTCATGTTGATGAATCGAGCATGACAGGGGAGAGTGATCATGTCGAAATTGAGCCGTTAAATAGTCCTTTCTTGTTGTCCGGCGCCAAAGTGGTCGACGGTTATGCAACAATGATGGTGACGTCCGTCGGAACTAACACGGCGTGGGGACAGCTGATGAGCACGGTATCAAGAGGTGACACGGAGGAGAGGACGCCGTTGCAGGCGCGTCTCGATAGCTTGACTACATCGATAGGAAAAGTAGGCCTCTCGGTTGCACTCCTTGTGTTTGTTGTAATGCTTATTCGTTATTTTACTGGAAACACCAGCAGTGACGACGGTTATACAGAGTTCAAGAAAGGTAGTACTGATTTGAATGATGTGTTCAATGCTGTTGTGAAGATAATTGCGGTTGCAGTCACCATTGTGGTCGTGGCGATCCCTGAAGGATTGCCATTGGCTGTCACTCTCACCTTGGCTTATTCCATGAAGAGAATGATGGCAGATCAGGCTATGGTGAGGAAACTCTCTGCTTGCGAAACTATGGGGTCGGCAACGGTTATATGCACTGATAAAACTGGGACTCTGACTCTCAATGAGATGAGAGTGAACAAGTTCTGGTTAGGCCTTGAAAACATCATTGAGAATTATTCCAATGCAATGGCCAAGAGAGTTGTGGAATTGTTCCACCAGGGAATAGGCCTCAATACAACTGGCAGTGTATATAAGCCTTTGCCGGAATCCGGGCCTGAAATCTCTGGTAGCCCTACAGAGAAAGCTATTCTCTTGTGGGCTGTGTCAGATTTAAGCATGGACATGGATGGACTAAAGCAGAAACATGAGATCATCCATGTTGAAACGTTTAACTCGGAGAAGAAACGAAGCGGGGTAGCAGTAAGGAAGAAGAGTGACAATACAGTACATGTACATTGGAAAGGTGCTGCTGAGATGATACTTGCAATGTGTTCTAACTACATTGATTGTAATGGCACAGAGAAGTCCCTTGGTGAAAAAGAACGGGATGAAATTGAGAAAATAATTCAGGGAATGGCAGCTAGTAGCCTAAGATGCATTGCTTTTGCTCACATTGAAATCGACTACAGCGATGATAAGCTACTAAGAGAAGATGGCTTGACATTGCTAGGAATCGTCGGCCTTAAGGATCCATGCCGGCCGGAAGTCAAGAAGGCTGTGGAAACTTGCAAGTATGCAGGTGTTGATATCAAGATGATCACCGGAGATAACTTATTCACGGCAAAGGCAATAGCAACAGAATGTGGAATACTAGACCTTAGTGATGATGTAGCCAAGGGACAAGTGGTGGAAGGTGAGGAATTTCGGAACTACACGGAGGAAGAGAGAATGGAGAAAGTAGATGATATTCGAGTGATGGCGAGATCTTCTCCTTTGGACAAACATTTGATGGTGCAATGTTTAAGAAAGAAAGGCCATGTAGTTGCAGTCACAGGAGATGGCACCAACGATGCGCCTGCGCTAAAAGAAGCTGATATTGGACTTTCTATGGGAATCCAAGGCACTGAAGTTGCCAAGGAAAGTTCTGACATTGTTATCTTGGATGACAACTTCAATTCTGTTGCAACGGTTTTAAGGTGGGGAAGATGTGTATATAACAATATACAGAAATTTATCCAATTTCAACTAACAGTGAATGTTGCAGCACTTGTGATAAATTTTATAGCTGCAGTTTCTGCTGGTGATGTTCCCTTAACAACAGTTCAACTTCTATGGGTTAATCTCATTATGGATACTCTAGGTGCTCTGGCCCTGGCCACGGAACGGCCTACAAAGGAGTTAATGGAGAAACGGCCGGTGGGGCGAACCGAGCCGCTTATCACTAACATTATGTGGAGAAACCTTTTACCTCAAGCTTTGTATCAGATTGCAGTCTTATTGGTTTTCCAATTCAAAGGGAAGGCAATATTCAATGTAGATGAGAAGGTAAAGAACACACTAATTTTCAATACTTTTGTTCTGTGCCAAGTTTTCAACGAGTTCAACTCTAGGAGTATGGAGAAACAAAATGTGTTCAGAGGCATTCACAAAAACCACTTGTTCCTTGGAATTGTTGGGATTACAATTGTTCTTCAAATTGCAATGGTGGAATTCCTGAGGAAGTTTGCTGATACAGAGAGATTAACATGGATTCAATGGGGATATTGTGTTTTATTTGCACCTTTTTCATGGCCACTGGCTTGGTTTGTAAAGTTCATTCCTGTTTCAGATAAGCCATTTTTCAGCTTCAAGATTAAGCGGTCTTTTTAG 2553 0.4367 QELSHCSLPFPTSEGWYEGGSIFVAVLLVVVVSSVSNLRQERQFHKLSKISSDIKVDVVRNGRPQQISIFDVLVGDIVSLKIGDQVPADGLFISGHSLHVDESSMTGESDHVEIEPLNSPFLLSGAKVVDGYATMMVTSVGTNTAWGQLMSTVSRGDTEERTPLQARLDSLTTSIGKVGLSVALLVFVVMLIRYFTGNTSSDDGYTEFKKGSTDLNDVFNAVVKIIAVAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRKLSACETMGSATVICTDKTGTLTLNEMRVNKFWLGLENIIENYSNAMAKRVVELFHQGIGLNTTGSVYKPLPESGPEISGSPTEKAILLWAVSDLSMDMDGLKQKHEIIHVETFNSEKKRSGVAVRKKSDNTVHVHWKGAAEMILAMCSNYIDCNGTEKSLGEKERDEIEKIIQGMAASSLRCIAFAHIEIDYSDDKLLREDGLTLLGIVGLKDPCRPEVKKAVETCKYAGVDIKMITGDNLFTAKAIATECGILDLSDDVAKGQVVEGEEFRNYTEEERMEKVDDIRVMARSSPLDKHLMVQCLRKKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFNSVATVLRWGRCVYNNIQKFIQFQLTVNVAALVINFIAAVSAGDVPLTTVQLLWVNLIMDTLGALALATERPTKELMEKRPVGRTEPLITNIMWRNLLPQALYQIAVLLVFQFKGKAIFNVDEKVKNTLIFNTFVLCQVFNEFNSRSMEKQNVFRGIHKNHLFLGIVGITIVLQIAMVEFLRKFADTERLTWIQWGYCVLFAPFSWPLAWFVKFIPVSDKPFFSFKIKRSF* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0179 850 Pfam haloacid dehalogenase-like hydrolase 277 593 - -
Ahy16g0179 850 PRINTS H+-transporting ATPase (proton pump) signature 579 595 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy16g0179 850 PRINTS H+-transporting ATPase (proton pump) signature 611 636 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy16g0179 850 PRINTS H+-transporting ATPase (proton pump) signature 433 451 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy16g0179 850 Gene3D - 276 624 IPR023214 -
Ahy16g0179 850 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 285 484 IPR023299 GO:0000166
Ahy16g0179 850 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 13 836 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Ahy16g0179 850 ProSitePatterns E1-E2 ATPases phosphorylation site. 281 287 IPR018303 -
Ahy16g0179 850 Pfam E1-E2 ATPase 54 257 - -
Ahy16g0179 850 Gene3D - 289 479 IPR023299 GO:0000166
Ahy16g0179 850 Pfam Cation transporting ATPase, C-terminus 664 834 IPR006068 -
Ahy16g0179 850 Gene3D - 41 154 - -
Ahy16g0179 850 SUPERFAMILY Calcium ATPase, transduction domain A 55 153 IPR008250 -
Ahy16g0179 850 SUPERFAMILY HAD-like 277 684 IPR036412 -
Ahy16g0179 850 SFLD p-type atpase 261 632 IPR044492 -
Ahy16g0179 850 SFLD Haloacid Dehalogenase 261 632 - -
Ahy16g0179 850 PRINTS P-type cation-transporting ATPase superfamily signature 603 615 - -
Ahy16g0179 850 PRINTS P-type cation-transporting ATPase superfamily signature 494 504 - -
Ahy16g0179 850 PRINTS P-type cation-transporting ATPase superfamily signature 579 598 - -
Ahy16g0179 850 PRINTS P-type cation-transporting ATPase superfamily signature 472 483 - -
Ahy16g0179 850 PRINTS P-type cation-transporting ATPase superfamily signature 279 293 - -
Ahy16g0179 850 PRINTS P-type cation-transporting ATPase superfamily signature 101 115 - -
Ahy16g0179 850 PANTHER CATION TRANSPORTING ATPASE 13 820 - -
Ahy16g0179 850 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 836 IPR023298 -
Ahy16g0179 850 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 220 315 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy16g0179 850 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 550 659 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy16g0179 850 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 22 197 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy16g0179 850 PANTHER CALCIUM-TRANSPORTING ATPASE 13 820 - -
Ahy16g0179 850 Gene3D - 13 832 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0179 Ahy-Chr16 1875514 1878964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0179 14 850 Primary Pumps ATPases AT3G63380 72.673 0.0 1188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0179 K01537 - gmx:100806797 1363.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0179 16 1875514 1878964 Ahy6g1146 6 16778915 16783052 hybridization
Ahy16g0179 16 1875514 1878964 Ahy12g1370 12 61151872 61153095 PCT