Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0157 ATGCCTTTACATGAAAGAGGTTTCTTTAAAGTTCTTGTTCTTAACTTTCAGCACGAGTTGAAAATTCCTAAAGCTTTTGTGAAAGAATATTGGAGAGGAGTATCAAATCCTATAGTGTTAAAGCTACCAAATAATCTTGAACAAAGAGTACATTGGATTCAAAAGAATGAAGATGAAGTTTGGTTGGAACAAGGTTGGGAACAAGTTGTGGAGGATTTTGGATTAAAACATTCTCAATTTTTGACTTTTGACTATAAAGGACGGTCTTTTTTTGAAGTCAAAATATATCCCAAGAATGATTCTGAGATAATGATTCCTCATCATCAAATATGTTTCTTTCAGATACTTGTTCACAACAAGTTTCACCAAAAGATGATGATTCCTAAATGTGCAAATGAATATTGGAAAAGAATGTCAAACCCTATAAAGTTGGTGTTACCTTATGGTGTTGAGAAGAAAGTGAATTGGACCAAAAGAGGAGAAAAGATTTGGTTGGAACAAGGTTGGGAAAAGGTTGTGGAATTGTGTGGTTTGAGTTATGAGTGGTTGTTGACTTTTGACTATAATGGAAGGTCTCGTTTTGAAGTCAAAGTATATGATACCACTGCTTTAAGGGTAGCTTATTATGATGTTGTTGAGAATAACAAAGATATTGATGAAACTGAGAGCGATGATGATGATGATGATGATGATGATGATGATGATGATGATGAAGAATCTCAGCATGAATTTGTTCAAGAACACTTCAAGAGAAAGAAGACTAACACAGTTAATGGGAGAAATGGGAATCCCAGTTTCAAGATTCGAATTCAAGAATCATATGTTGGGTCAGGTAGCGTGGCAATACCAGCAACGTTTGCAAGGAAGCATTTGGAGGAAGGACCGATTCGTATGAATGTGGGTAACAGAACTTGGACTGTGTGCTACAAAACTTGGATAGGAAGTGGCATATATCGCAAACACAAATTGCAAAGTGGGTGGCTCAGATTTAGAAGAGAGAACAATTTAGAGGTTGGTGATGTGTGTGTCTTTGAGTTAATTAGCAAATTTCCTCAAACAATGACCATGAGATTGCAGAGTGGATGA 1086 0.36 MPLHERGFFKVLVLNFQHELKIPKAFVKEYWRGVSNPIVLKLPNNLEQRVHWIQKNEDEVWLEQGWEQVVEDFGLKHSQFLTFDYKGRSFFEVKIYPKNDSEIMIPHHQICFFQILVHNKFHQKMMIPKCANEYWKRMSNPIKLVLPYGVEKKVNWTKRGEKIWLEQGWEKVVELCGLSYEWLLTFDYNGRSRFEVKVYDTTALRVAYYDVVENNKDIDETESDDDDDDDDDDDDDDEESQHEFVQEHFKRKKTNTVNGRNGNPSFKIRIQESYVGSGSVAIPATFARKHLEEGPIRMNVGNRTWTVCYKTWIGSGIYRKHKLQSGWLRFRRENNLEVGDVCVFELISKFPQTMTMRLQSG* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0157 361 MobiDBLite consensus disorder prediction 217 248 - -
Ahy16g0157 361 Gene3D - 244 359 IPR015300 -
Ahy16g0157 361 SUPERFAMILY DNA-binding pseudobarrel domain 261 354 IPR015300 -
Ahy16g0157 361 SUPERFAMILY DNA-binding pseudobarrel domain 107 201 IPR015300 -
Ahy16g0157 361 SUPERFAMILY DNA-binding pseudobarrel domain 7 99 IPR015300 -
Ahy16g0157 361 ProSiteProfiles B3 DNA-binding domain profile. 5 99 IPR003340 GO:0003677
Ahy16g0157 361 PANTHER B3 DOMAIN-CONTAINING 108 254 - -
Ahy16g0157 361 PANTHER B3 DOMAIN-CONTAINING 8 107 - -
Ahy16g0157 361 ProSiteProfiles B3 DNA-binding domain profile. 265 361 IPR003340 GO:0003677
Ahy16g0157 361 PANTHER B3 DOMAIN-CONTAINING 260 349 - -
Ahy16g0157 361 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 260 349 - -
Ahy16g0157 361 Gene3D - 3 100 IPR015300 -
Ahy16g0157 361 Gene3D - 104 203 IPR015300 -
Ahy16g0157 361 MobiDBLite consensus disorder prediction 217 241 - -
Ahy16g0157 361 CDD B3_DNA 8 97 IPR003340 GO:0003677
Ahy16g0157 361 SMART B3_2 266 360 IPR003340 GO:0003677
Ahy16g0157 361 SMART B3_2 112 202 IPR003340 GO:0003677
Ahy16g0157 361 SMART B3_2 8 99 IPR003340 GO:0003677
Ahy16g0157 361 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 108 254 - -
Ahy16g0157 361 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 8 107 - -
Ahy16g0157 361 CDD B3_DNA 264 347 IPR003340 GO:0003677
Ahy16g0157 361 Pfam B3 DNA binding domain 266 352 IPR003340 GO:0003677
Ahy16g0157 361 Pfam B3 DNA binding domain 8 97 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0157 Ahy-Chr16 1611677 1614516 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0157 6 347 B3 DNA Binding Superfamily AT3G18990 23.889 4.32e-20 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Ahy16g0157 B3 2.40E-13 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0157 - - ahf:112718388 610.527