Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0135 ATGGAAGAAGAGGATACGGATCCATCGCCCCCGGAAACTGCTGGCAGATCGTACGAGTGTGTCTTCTGCAAGAGAGGCTTCACAACTGCACAAGCCTTAGGTGGACACATGAACATTCATAGAAAGGACAAGGCCAATAACAGAACTAAACCTACTACTACTTTTCTTATTCCTTCTTCTTTGATAAGTTCTTCTTCAACTCAACTTCATAATTCCGATCATCATCTCGGCTTCTATTACTTTTCATCATCAACTTCCAGACGGAATACCTATGAGGTTCATTCTGATTGTTCTTCTTCCAATCAAGGTTATTTTCCTCCACCAAAGGAGAGAAACTTGAGTTCTTGCAATAATAATAATAATAATAATCCATCATCGTCATCATGTGTTGCTCAAGTTAAAGACAAGGTACAAGATAACAGTGATGAAGGTGGCGGCCTTGATTTAGAGCTCAGACTTGGTCATCATCATCCTTAA 477 0.4004 MEEEDTDPSPPETAGRSYECVFCKRGFTTAQALGGHMNIHRKDKANNRTKPTTTFLIPSSLISSSSTQLHNSDHHLGFYYFSSSTSRRNTYEVHSDCSSSNQGYFPPPKERNLSSCNNNNNNNPSSSSCVAQVKDKVQDNSDEGGGLDLELRLGHHHP* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0135 158 MobiDBLite consensus disorder prediction 91 158 - -
Ahy16g0135 158 MobiDBLite consensus disorder prediction 136 158 - -
Ahy16g0135 158 Gene3D Classic Zinc Finger 6 75 - -
Ahy16g0135 158 SUPERFAMILY beta-beta-alpha zinc fingers 15 45 IPR036236 -
Ahy16g0135 158 ProSiteProfiles Zinc finger C2H2 type domain profile. 18 45 IPR013087 -
Ahy16g0135 158 Pfam C2H2-type zinc finger 18 42 - -
Ahy16g0135 158 PANTHER OS07G0101800 PROTEIN 8 156 - -
Ahy16g0135 158 MobiDBLite consensus disorder prediction 91 135 - -
Ahy16g0135 158 ProSitePatterns Zinc finger C2H2 type domain signature. 20 40 IPR013087 -
Ahy16g0135 158 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 8 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0135 Ahy-Chr16 1377570 1378535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0135 16 158 C2H2 Transcription Factor Family AT4G17810 32.192 2.94e-14 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy16g0135 zf-C2H2_6 1.30E-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0135 - - aip:107647878 303.523