Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0131 ATGAAGATGACAGGTTCAGGTACACCTTGTGGAGCCTGCAAATTCTTGAGGAGAAAATGCGTGAGAGGTTGTGTTTTTGCACCTTATTTTTGCCATGAACAAGGTGCTACTCATTTTGCAGCCATTCATAAGGTCTTTGGTGCAAGCAATGTCTCCAAGCTCCTTGCTCATCTTCCTGTCGCCGATCGCTGCGAAGCCGCCGTCACCATCTCATTCGAAGCTCAGGCAAGGCTTCAAGATCCAATCTATGGCTGCGTCGCACATATTTTTGCCCTACAACAACAGGTGATGAATTTACAAGCACAGTTGGCTTATTTAAGGGAACAAGCTGCAGAGAGTTGTAATCTGAACCCTAATAATACTACTGCTCTTTACCCCAATCACCAAGATCTTGGAAATTCGTTCCAGATGGAAAATTCCACCATGGTTCCACAGTTTCTTTCTGATAGTTCATCTAATTATCCCTCATCAGCAACACAACAATACCATGGGAATACTCGTAGTAGTCTCATCATGATGGAATCAAACCCTATTGAGAACTATGAAAATTCAAGCATCTCCTTTGATGAGACTTGTGACACGGTGTTCTTTGACATGAAAAGACTGTGGCCCTCTCAACTTCAATAA 627 0.4306 MKMTGSGTPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVADRCEAAVTISFEAQARLQDPIYGCVAHIFALQQQVMNLQAQLAYLREQAAESCNLNPNNTTALYPNHQDLGNSFQMENSTMVPQFLSDSSSNYPSSATQQYHGNTRSSLIMMESNPIENYENSSISFDETCDTVFFDMKRLWPSQLQ* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0131 208 PANTHER LOB DOMAIN CONTAINING PROTEIN 3 185 - -
Ahy16g0131 208 Coils Coil 89 109 - -
Ahy16g0131 208 Pfam Lateral organ boundaries (LOB) domain 9 106 IPR004883 -
Ahy16g0131 208 ProSiteProfiles LOB domain profile. 8 110 IPR004883 -
Ahy16g0131 208 PANTHER LOB DOMAIN-CONTAINING PROTEIN 17-RELATED 3 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0131 Ahy-Chr16 1325391 1326708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0131 9 170 AS2 family AT3G58190 60.116 1.67e-69 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy16g0131 LOB 1.50E-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0131 K13945 K13944 gmx:100816960 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0131 16 1325391 1326708 Ahy16g0131 16 1325391 1326708 ECH
Ahy16g0131 16 1325391 1326708 Ahy6g1201 6 17688963 17690371 hybridization
Ahy16g0131 16 1325391 1326708 Ahy12g0867 12 16808155 16809843 PCT
Ahy16g0131 16 1325391 1326708 Ahy2g0735 2 12934570 12936176 PCT
Ahy12g0867 12 16808155 16809843 Ahy16g0131 16 1325391 1326708 PCT
Ahy2g0735 2 12934570 12936176 Ahy16g0131 16 1325391 1326708 PCT