Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0127 ATGGAGGGAGAGAGACACTACAGAGGGATTCGTAGGAGGCCATGGGGCAAATTCGCTGCTGAGATTAGAGACCCAACCAGGAAAGGGACTCGTATTTGGCTTGGTACCTTTGACACTGCTGAACAAGCTGCTAGAGCCTATGATGCTGCTGCTTTCCATTTTCGTGGTCATAGAGCCATTCTCAATTTCCCAAATGACTATGTCGCTGCTTCTTCTTCCGGTTCTTCTAGAAGATCACAACAACAGCAAGAACATATGCATCAACTTGATCACTACACTACTACCACTTCTTTTGAGTTGGAATACTTTGACAATAAGTTGTTGGAAGAACTCCTTCAGGGGCAAGATGCTACTACACGCACATCCCTACCTAGCTAG 378 0.4577 MEGERHYRGIRRRPWGKFAAEIRDPTRKGTRIWLGTFDTAEQAARAYDAAAFHFRGHRAILNFPNDYVAASSSGSSRRSQQQQEHMHQLDHYTTTTSFELEYFDNKLLEELLQGQDATTRTSLPS* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0127 125 PANTHER DNA-BINDING DOMAIN 5 82 IPR044808 GO:0003700|GO:0009873
Ahy16g0127 125 SUPERFAMILY DNA-binding domain 6 65 IPR016177 GO:0003677
Ahy16g0127 125 CDD AP2 6 66 IPR001471 GO:0003700|GO:0006355
Ahy16g0127 125 ProSiteProfiles AP2/ERF domain profile. 6 64 IPR001471 GO:0003700|GO:0006355
Ahy16g0127 125 PANTHER PATHOGENESIS-RELATED GENES TRANSCRIPTIONAL ACTIVATOR PTI5 5 82 - -
Ahy16g0127 125 SMART rav1_2 6 70 IPR001471 GO:0003700|GO:0006355
Ahy16g0127 125 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Ahy16g0127 125 MobiDBLite consensus disorder prediction 69 91 - -
Ahy16g0127 125 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Ahy16g0127 125 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Ahy16g0127 125 Pfam AP2 domain 6 57 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0127 Ahy-Chr16 1264146 1264899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0127 7 116 AP2-EREBP Transcription Factor Family AT3G23230 53.846 1.91e-38 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy16g0127 AP2 6.80E-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0127 - - adu:107493082 187.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0127 16 1264146 1264899 Ahy16g0127 16 1264146 1264899 ECH
Ahy16g0127 16 1264146 1264899 Ahy6g1206 6 17765902 17766630 hybridization
Ahy16g0127 16 1264146 1264899 Ahy12g0915 12 18377675 18378587 PCT
Ahy16g0127 16 1264146 1264899 Ahy2g0783 2 14287336 14288181 PCT
Ahy12g0915 12 18377675 18378587 Ahy16g0127 16 1264146 1264899 PCT
Ahy2g0783 2 14287336 14288181 Ahy16g0127 16 1264146 1264899 PCT